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Brettanomyces nanus: FOA43_001046
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Entry
FOA43_001046 CDS
T07002
Name
(RefSeq) uncharacterized protein
KO
K11648
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
Organism
bnn
Brettanomyces nanus
Pathway
bnn03082
ATP-dependent chromatin remodeling
bnn03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
bnn00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
FOA43_001046
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
FOA43_001046
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
bnn01009
]
FOA43_001046
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bnn03021
]
FOA43_001046
03036 Chromosome and associated proteins [BR:
bnn03036
]
FOA43_001046
Protein phosphatases and associated proteins [BR:
bnn01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
FOA43_001046
Transcription machinery [BR:
bnn03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
FOA43_001046
SWI/SNF complex
FOA43_001046
Chromosome and associated proteins [BR:
bnn03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
FOA43_001046
PBAF complex
FOA43_001046
SWI/SNF complex
FOA43_001046
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF5
Motif
Other DBs
NCBI-GeneID:
62194447
NCBI-ProteinID:
XP_038777298
LinkDB
All DBs
Position
1:2267838..2270003
Genome browser
AA seq
721 aa
AA seq
DB search
MFNGQGQWGPVGSQGSPNLQQQQQQRSQQAQQQAQQLAQQQGISQGQQNPQHSGKAPQAG
GSTRSSLTPQQIIQGLMRLDPQQRNTIIQKNPQMQLFLQQYEQHRKLALQQAQRNNEGRQ
NAGNQSSQQYNSFANPIQRRGRPSQQAQLAEQAHIQMNSRRMMAQTAQDSHASMVQNIVT
HGSSLGAVSRGGSAGVDAAVATPDVSSVPGTASSVAPAASGMGSSAAPQLPPALPLKDVH
HWSRLLSQHNRNVPSSLKIYEEILERDSQFENRLRQEQKKPFDADMAQRMVRDLKFYQQI
RDSRLKAINLRPELNKVTNRLWGEGYAGYGNGFTNSRTEIILPDHRKKGSVAKDIYISPE
KITEQAITTEELVPIRLEFDQDRDGFQLSDTFLWNLNEKCISLESFATTLMADYQFPVER
ASQFKEKIVSSIKEQLDEYHPMIYKEQESSKFSDLRFPISLDITIANNQLVDRFDWDIMN
PDNDPEEFAEVLCAEMSLPGEFVTAVAHSIREQCQTYIRSLFLIGYRFDGSAVTGDELKE
FVKPSLDAHNIVRPRYLLSDYTTSLQELSYDNVEKLKKERERESRRKKRGQMRIGRRGGL
VLPDLHDLPKTFRTPVPNSVLPGGVDLGHPTDSYLEYPISIEIPQRQLKALDEYKKEQAR
LKEQERLEQLELHKRREMERVQGQQLIQRARVKMRLPEGLQSKVTYRNEYEKAFVVKIRF
V
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
atgttcaatggacagggacaatggggtcccgtgggatctcagggtagtcctaatttgcag
cagcagcagcaacaacgatcacaacaggctcagcaacaggctcagcagctagctcagcag
cagggaattagtcaaggacagcaaaacccacaacattccgggaaggccccacaagctggt
ggatccactagatcttccttaacacctcagcagatcattcaggggctcatgcgactcgat
ccacagcagagaaacactattattcagaagaatcctcagatgcagttgtttttacagcaa
tacgaacagcatagaaaacttgcactgcaacaggctcaaagaaacaatgaaggacgacag
aatgctggaaatcagtcatctcagcagtataattcattcgccaatcctattcaacgacgc
ggacgcccttctcaacaagctcaactggctgaacaggcccatatacagatgaattcacgt
cgaatgatggctcagactgctcaagatagtcatgcttcgatggtacagaatattgttacg
catggttcttctttaggtgctgtttcgcgtggtggctccgcaggcgtcgacgccgcagtt
gctacaccagatgtctcttcggtgccaggcactgcatcttctgtggctccggcggcttca
gggatggggtcttcggcggcccctcaactaccaccagcgcttcctctgaaagatgttcat
cattggtcacgtcttctctctcagcataatcgtaatgtaccgtcctcacttaaaatctat
gaagaaatactagaaagagactctcaatttgaaaacaggcttagacaggagcagaaaaag
ccgtttgatgcagatatggctcaaagaatggttcgagatttgaagttctatcagcaaatt
agagattcacggcttaaggccattaatctacgtccagaactgaataaggttaccaataga
ctctggggagaaggctatgcgggctatggtaatggttttaccaacagtcggacggaaatt
atattaccagaccatcgtaagaagggaagtgtagctaaagacatttacatttccccagaa
aagatcaccgagcaggctataacgacggaagagttggtacccattcgacttgagttcgac
caggatagggacggatttcagctgagtgacacattcctatggaatctaaatgagaaatgt
atctctcttgaaagttttgcgacaactcttatggcggactatcagtttccagtagaaaga
gcatcacaattcaaggagaaaatcgtcagtagtatcaaggaacagcttgatgagtatcat
cctatgatctataaagaacaggagagctccaagttttcggatctgagattccctatatct
ctcgatatcactatagcgaacaatcaacttgtagatagatttgactgggatatcatgaat
ccagataacgatccggaggagtttgcagaggttttgtgtgcagaaatgtcattgccagga
gaatttgtcacggcagtagcacattctataagagaacaatgccaaacgtatatccgatca
ttgtttttaattggatatcggtttgatggttccgccgtgacaggagatgagctgaaggaa
tttgtaaagccaagtttggatgcccataacatagtgaggccaagatatttgctttcagat
tacactacgtctctacaggagctttcgtatgacaacgtggagaagctaaagaaggaacgg
gagagagaatcgcgtagaaagaaaagaggacagatgagaattggaagaaggggaggactg
gttcttccagatcttcacgaccttcctaagaccttccgtacacctgtacctaacagtgtt
ttgccgggaggtgtggatttgggtcatcccaccgattcgtatctcgaatatcctatatcg
attgagattccacagcgacagttgaaagctttggatgaatataagaaggagcaggccaga
ttgaaagaacaggaaagactggaacagttagaactacacaagagacgcgaaatggaaaga
gttcaaggacagcagttgatacagagggctcgggttaaaatgagacttcctgaaggatta
cagagcaaagttacttaccgcaacgagtatgaaaaggcatttgtggttaagattcggttt
gtgtag
DBGET
integrated database retrieval system