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Acanthopagrus latus (yellowfin seabream): 119030345
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Entry
119030345 CDS
T08233
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1-like
KO
K11648
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Pathway
alat03082
ATP-dependent chromatin remodeling
alat03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
119030345
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
119030345
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
alat01009
]
119030345
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
alat03021
]
119030345
03036 Chromosome and associated proteins [BR:
alat03036
]
119030345
Protein phosphatases and associated proteins [BR:
alat01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
119030345
Transcription machinery [BR:
alat03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
119030345
SWI/SNF complex
119030345
Chromosome and associated proteins [BR:
alat03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
119030345
PBAF complex
119030345
SWI/SNF complex
119030345
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF5
INI1_DNA-bd
DUF1679
Motif
Other DBs
NCBI-GeneID:
119030345
NCBI-ProteinID:
XP_036973735
LinkDB
All DBs
Position
12:3170130..3180295
Genome browser
AA seq
368 aa
AA seq
DB search
MQLALSKTFGQKPVKFQLEQDGDFYMVGSEVGNYLRMFRGSLYKRYPSLWRRLASVEERK
KIVASSHATSVTLLKASECEEIFEGNDEKYKAVSISTEPPAYLREQKAKRSSQWVPTLPN
SSHHLDAVPCSTTINRNRMGRDKKRTFPLCFDDHDPAVIHENAAQVEALVPIRLDMEIDG
QKLRDAFTWNMNEKLMTPEMFAEILCDDLDLNPLAFVPAIASAIRQQIESYPTDSILEEQ
ADQRVIIKLNIHVGNISLVDQFEWDMSERENSPESFALKLCSELGLGGEFVTTIAYSIRG
QLSWHQRTYAFSENPLPTVEIAIRNTGDADQWCPLLETLTDAEMEKKIRDQDRNTRRMRR
LANTAPSW
NT seq
1107 nt
NT seq
+upstream
nt +downstream
nt
atgcaattggctctcagtaaaacgtttggccagaagccagttaaattccagttagaacaa
gatggggacttttacatggttgggtcagaggtgggaaattatctgcgtatgttcagaggc
tctctgtataaaagatatccatctttatggaggaggctggcctcagtggaggagaggaag
aaaatcgtagcatcatcacatgccactagtgttactctgctgaaggcctcagaatgtgaa
gaaatcttcgagggtaatgatgagaaatacaaggcggtgtccatcagcacagagccccca
gcttacctcagagagcagaaagcaaagcgaagcagtcagtgggtccccacgctgcccaac
agctctcatcatcttgatgccgtgccttgctccactaccatcaaccgcaaccgaatgggg
cgtgacaagaagaggaccttccccctgtgctttgatgaccacgatcctgcagtgatccat
gagaacgcagcccaggtcgaggcgctggtccccattcgtctagatatggagattgatgga
cagaaactgcgagacgccttcacttggaacatgaacgagaaactgatgaccccggagatg
tttgctgagattttatgtgatgacctggatctgaaccctctggcctttgttcccgccatt
gcctcagccattcgccagcagatagaatcctaccccaccgacagcatactagaagagcag
gcagaccagagagtcatcatcaagctgaacatccacgttggaaacatctctctggtggac
cagtttgagtgggacatgtcagagagagagaactcaccagagtcgtttgcactgaagttg
tgctctgagcttggtcttggaggagagtttgtcaccaccatcgcctacagcattcgcggt
cagctcagctggcatcagaggacctatgctttcagtgagaacccactccccacagtagag
attgccatccgcaacacaggcgatgcagatcagtggtgccccctgctggagaccctcaca
gatgctgagatggagaagaagatccgagaccaagacaggaacacaaggcgcatgagacga
ctggccaacacggctccatcctggtag
DBGET
integrated database retrieval system