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Yarrowia lipolytica: 2911793
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Entry
2911793 CDS
T01033
Symbol
YALI2_E00267g
Name
(RefSeq) SWI/SNF chromatin-remodeling complex subunit SNF5
KO
K11648
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
Organism
yli
Yarrowia lipolytica
Pathway
yli03082
ATP-dependent chromatin remodeling
yli03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
yli00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
2911793 (YALI2_E00267g)
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
2911793 (YALI2_E00267g)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
yli01009
]
2911793 (YALI2_E00267g)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
yli03021
]
2911793 (YALI2_E00267g)
03036 Chromosome and associated proteins [BR:
yli03036
]
2911793 (YALI2_E00267g)
Protein phosphatases and associated proteins [BR:
yli01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
2911793 (YALI2_E00267g)
Transcription machinery [BR:
yli03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
2911793 (YALI2_E00267g)
SWI/SNF complex
2911793 (YALI2_E00267g)
Chromosome and associated proteins [BR:
yli03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
2911793 (YALI2_E00267g)
PBAF complex
2911793 (YALI2_E00267g)
SWI/SNF complex
2911793 (YALI2_E00267g)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF5
Herpes_UL42
Motif
Other DBs
NCBI-GeneID:
2911793
NCBI-ProteinID:
XP_503887
UniProt:
Q6C625
LinkDB
All DBs
Position
E:1703613..1705844
Genome browser
AA seq
743 aa
AA seq
DB search
MSFRQQFQQGGNPNGQMGFNNMNMSPNMNNAKIGGMDMGAQMGQMGQMGQMPQMAQMGQM
GQMGGMPQMGGPMGGQMNGMNMGGMSGAGGIPNVGGMPNMAGMPNMGQGMNMGQGMNPQV
GRGGPMGPQGMMGQQGMGGMQQGGQVQMGGGPQMQPPQRQPQPQQQQQQQQQQQQHHHQQ
QQQQVPMPQSQLIPQQGGIPVMAGGQPQKNFDFPPPGQTMMQPGLTVPPVQSHLGLVSSD
DARQQETPLVNPPSAAESLAEMPTLFNGQGITDLTEIMKNKRDPKTAQELNLRRFVSKDL
NESSTLPKKLKQEADKLNAKRYEISFYHSFGPIRSQEPQSIFQDGYLGYGNGWTGLNTRF
VYPRDRKKHNRNTRDLVLSRQQMNQQAAEPELLVPIRLDFDLGRLRLRDTFMWNLNEKTY
PVHFFVENMFEDFHFPHQYIQSVTNSITEQLQDFQPHQYPQDPRHVIGNGDATRNEDMRV
VVRLDITVGQHNLIDQFEWDINDSLNSPEEFAATMCAELSLSGEFATAIAHAIHEQTQVF
SKSLLLLGHTFDQRPVDDEDIRREICAPIPDGSVMRPKNSVNEYSPALFEISEAELSRLD
KDKDRDSRQKRRQGRAGRRGAPSLPDFKKVVRTFRTPVYSAVLPGAVDRKVELAKQALQA
EEEEEEEDSDGNVVVRPAKRQRTTGRHVPVRAAAANAAVAVAAQSQELETNYVEELADPT
SFWVTLKVPPQQLARLMMIPRFG
NT seq
2232 nt
NT seq
+upstream
nt +downstream
nt
atgtcgttccggcaacagttccagcagggaggcaatcccaatggacagatgggcttcaac
aacatgaacatgagcccaaacatgaacaacgcgaaaatcggaggcatggatatgggagcg
cagatgggccagatgggccagatgggccagatgccacagatggctcagatgggccaaatg
ggccagatgggaggcatgccgcaaatgggcggacccatgggtggccagatgaacggcatg
aacatgggtggcatgtccggagcaggtggcatacccaatgtcggagggatgcccaacatg
gcaggaatgcccaacatgggtcagggtatgaacatgggccaaggaatgaacccccaagtt
ggtcgaggtggacccatgggacctcagggtatgatgggccagcagggcatgggcggcatg
cagcagggtggccaggtgcagatgggtggaggaccacagatgcaaccccctcagcgtcag
ccacagccacagcagcagcagcagcagcaacaacaacagcagcagcatcaccaccaacaa
cagcagcagcaggtgcctatgccgcaatcgcagctcatccctcagcaaggaggcatcccc
gtcatggctggaggtcaaccccaaaagaactttgatttccccccaccaggccagaccatg
atgcagcccggcctcactgtccctcccgtgcagtcacatctgggtcttgtgagttccgat
gacgcccgacaacaggagacacctctcgtgaaccctccctcggctgccgagtcgctcgcc
gagatgcccacgctgttcaacggccagggaattactgatctcacagagattatgaaaaac
aaacgtgaccccaagaccgcccaagaactcaacctgcgtcgttttgtatccaaggatctc
aacgagtcctccacgctgcccaaaaagctcaagcaggaggccgacaagctcaacgccaag
cgatatgagatctctttctaccactcgtttggtcccattcgttcgcaggagccccagtcc
atttttcaagacggatacctcggctatggcaatggttggacaggtctcaacacacggttc
gtgtacccccgtgaccgaaagaaacacaaccgaaacacccgggacctggtgctgtcgcgt
cagcagatgaaccagcaggcggcagaaccggaactgctggtgcccattcgtcttgacttc
gatctcggacgacttcgacttagagacaccttcatgtggaaccttaacgagaagacatat
cccgtgcactttttcgtggagaacatgttcgaggacttccacttcccccaccagtacatt
cagtcggtcacaaactccatcactgaacagctgcaggatttccagccgcatcagtacccc
caggaccctcgacacgtgattggcaacggagatgcgacccgaaacgaagacatgcgagtt
gtggtgcgcctggatatcacagttggtcagcacaatctaattgaccagtttgagtgggac
atcaacgattctctcaactccccagaagagtttgctgccaccatgtgtgccgagctgtct
ctgtctggagagtttgctactgctattgcccatgccatccatgagcagacacaggtcttt
tcaaagtcgctgttgcttcttggccacacctttgatcagcgacctgtggacgacgaggac
attcgacgtgagatttgcgctcccatacccgatggatccgtcatgagacccaagaactcg
gtcaacgagtactctcctgcgctgtttgagatttctgaggccgagctgagtcgtctggat
aaggacaaggaccgagactctcgtcagaaacgtcgacagggacgagccggcagacgaggc
gcaccttctctgcccgatttcaagaaggttgtccggacgttccgaactcccgtttactcc
gctgtgcttcctggagctgtcgaccgaaaggtggagttggctaaacaggcacttcaggca
gaggaggaggaagaggaagaggacagtgatggaaacgttgtggtgcggcctgccaagcga
cagcgaaccaccggtaggcatgttccagtgcgagctgctgctgctaatgccgctgtggct
gtggctgcacagagccaggagctggaaaccaactatgtggaggagctggcggatcctact
tcattctgggtcactctgaaggtgcccccacagcagcttgcgcggctgatgatgattcct
cggtttggataa
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integrated database retrieval system