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Varanus komodoensis (Komodo dragon): 123030408
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Entry
123030408 CDS
T07701
Symbol
SMARCB1
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
KO
K11648
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
Organism
vko
Varanus komodoensis (Komodo dragon)
Pathway
vko03082
ATP-dependent chromatin remodeling
vko03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
vko00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
123030408 (SMARCB1)
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
123030408 (SMARCB1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
vko01009
]
123030408 (SMARCB1)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vko03021
]
123030408 (SMARCB1)
03036 Chromosome and associated proteins [BR:
vko03036
]
123030408 (SMARCB1)
Protein phosphatases and associated proteins [BR:
vko01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
123030408 (SMARCB1)
Transcription machinery [BR:
vko03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
123030408 (SMARCB1)
SWI/SNF complex
123030408 (SMARCB1)
Chromosome and associated proteins [BR:
vko03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
123030408 (SMARCB1)
PBAF complex
123030408 (SMARCB1)
SWI/SNF complex
123030408 (SMARCB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF5
INI1_DNA-bd
DUF1679
Motif
Other DBs
NCBI-GeneID:
123030408
NCBI-ProteinID:
XP_044300241
Ensembl:
ENSVKKG00000009132
LinkDB
All DBs
Position
Unknown
AA seq
386 aa
AA seq
DB search
MMMMALSKTFGQKPVKFQLEEDGEFYMIGSEVGNYLRMFRGSLYKRYPSLWRRLATVEER
KKIVASSHESQRSHSPRRYHGYTTLATSVTLLKASEVEEILDGNDEKYKAVSISTEPPTY
LREQKAKRNSQWVPTLPNSSHHLDAVPCSTTINRNRMGRDKKRTFPLCFDDHDPAVIHEN
ASQPEVLVPIRLDMEIDGQKLRDAFTWNMNEKLMTPEMFSEILCDDLDLNPLTFVPAIAS
AIRQQIESYPTDSILEDQSDQRVIIKLNIHVGNISLVDQFEWDMSEKENSPEKFALKLCS
ELGLGGEFVTTIAYSIRGQLSWHQKTYAFSENPLPTVEIAIRNTGDADQWCPLLETLTDA
EMEKKIRDQDRNTRRMRRLANTAPAW
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atgatgatgatggcgctgagcaaaacctttgggcagaagcccgtcaagttccagctggag
gaggacggcgagttctacatgatcggctccgaggtgggcaattacctgcgcatgttccgc
ggctcgctgtacaagcgctacccttcgctctggaggcgcctggccacagtggaggagcgc
aagaagatcgtcgcctcttcccacgagtctcaacggagccacagccccaggagatatcat
ggttatactacactagctactagtgtgactctcttgaaagcctctgaagtagaagagatc
ttggatggaaatgatgagaaatacaaagcagtctctatcagcactgagcctccaacctac
cttagagagcaaaaggcaaaacggaacagccagtgggttccaaccctcccaaacagttcc
catcatcttgatgctgtgccatgttcaacaaccattaacagaaatcggatgggcagggat
aagaagagaacttttccactctgctttgatgaccatgacccagctgtgatccatgagaat
gcctcacagccagaggtgctggttccaatccgactggacatggaaattgatggacagaag
ctgagagatgcctttacgtggaatatgaatgaaaaactgatgactccagaaatgttttca
gaaattctctgtgatgacctggatttgaatcccctgacttttgtgcctgctattgcatca
gcgatacgacagcaaattgaatcttatcctacagacagtatcctagaggaccagtcggat
cagcgtgtcattattaagctcaacatccatgtgggtaatatctccctggtggaccagttt
gagtgggacatgtctgaaaaggagaattccccggagaagtttgcactgaagctgtgttca
gagcttggtttgggcggtgaatttgtcaccaccattgcttacagcatccgagggcagctg
agctggcatcagaagacatatgcattcagtgagaatcctctgccaacagtagagattgct
attcgtaacactggggatgctgaccagtggtgccctctgcttgaaacactgacagatgca
gagatggagaagaagatccgagaccaagacagaaacaccaggcgcatgaggcgtttggcc
aacacagccccagcctggtaa
DBGET
integrated database retrieval system