Long-term ecological research in Australia:
innovative approaches for future benefits
Jean-Marc Hero1, J. Guy Castley1, Mikalah Malone1, Ben Lawson1,and
William E. Magnusson2
Environmental Futures Centre, Griffith School of Environment, Gold Coast campus
Griffith University, Qld 4222, Australia. e-mail: m.hero@griffith.edu.au
2
Instituto Nacional de Pesquisas da Amazonia (INPA), CP 478, 69011-970 Manaus AM, Brazil.
ABSTRACT
1
PPBio (Program for Planned Biodiversity and Ecosystem Research) is a system for long-term
ecological research designed to answer integrated multidisciplinary research questions. The system is
based on permanent plots (terrestrial and aquatic) that are systematically spaced in grids (e.g. 5 km
x 5 km) and modules (e.g. 5 km x 1 km) within a hierarchical long-term ecological research (LTER)
network. Modules and grids sample biodiversity and biophysical variation in an unbiased manner
across the landscape. Infrastructure includes permanent plots that follow contour lines (survey lines
with all measurements recorded on the horizontal plane) which facilitates orthorectification and
validation of satellite imagery. All research data and accompanying metadata collected are stored and
are publicly available to facilitate ongoing integrated multidisciplinary research at local, meso, landscape
and global scales. The PPBio system was designed to overcome the problems of idiosyncratic designs
and incompatible data arising from ‘stand alone’ research projects, which are difficult to integrate or
continue through time. The sampling design and data sharing arrangements are structured so that
PPBio sites serve as hubs for research, building long-term datasets that integrate studies within and
among sites, providing the information necessary to understand and respond to complex and dynamic
environmental issues.
Key words: Biodiversity Monitoring, Condition Assessment, LTER, ILTER, data management, natural resource
management, long-term ecological research
Biodiversity monitoring and the need
for long-term ecological research
Land managers in Australia and across the globe
face many challenges in responding to complex and
dynamic ecological phenomena. Effective management
of natural resources is dependent on robust scientific
information, with long-term data being particularly
valuable in understanding how ecosystems respond
to events such as climate change or management
interventions (Hughes 2000; Stork et al 1996).
Nations across the globe grapple with the challenge
of meeting the 2010 Convention on Biological
Diversity targets for conservation and sustainable
use, but attainment of these goals is underpinned by
assessments of baseline conditions (inventories) and
trends in these conditions (monitoring) (Stork et al
1996). There is little doubt that biological research
and monitoring is an important scientific activity
that will enable scientists and managers to review the
impacts of both natural and anthropogenic impacts on
our natural environments facilitating a reporting on
the state of the environment (e.g. Beeton et al 2006).
However, the manner in which such monitoring
should be undertaken remains a vigorous point of
discussion (Purvis and Hector 2000; Yoccoz et al 2001;
Nielsen et al 2007).
In response to the need for nationwide measures of
biodiversity a number of countries have developed l
arge scale monitoring initiatives (see reviews by Wiser
et al 2001; Craine et al 2007) with some building on
historical data archives (e.g. Wiser et al 2001) and
others developing strategies that encompass entire
countries (e.g. Lane 1997, Swiss Biodiversity Monitoring
Programme; Hintermann et al 2002). Perhaps the most
well known of these approaches is the LTER program,
initiated by the National Science Foundation in the
USA in the late 1970’s (Callahan 1984, Hobbie et
al 2003), aimed at addressing the need for long-term
studies addressing large scale issues. Global interest
in the need for long-term research prompted the
establishment of an international network of sites for
long-term ecological research (ILTER). At present 37
counties have established LTER networks as part of
this global initiative and Australia is included as one
of these participating nations (see http://www.ilternet.
edu). However, the manner in which these ILTER
networks are managed and the level of coordination
among the sites is highly variable. For example the
Environmental Change Network (ECN) in the United
Kingdom has established a series of 12 terrestrial and
45 freshwater sites. At each of these sites a series of
standardised data is collected to build up a national
database for environmental monitoring and reporting.
Conversely, Australia has only 5 sites listed in a small
informal network (see http://www.daff.gov.au/brs/
Theme edition of Australian Zoologist “Ecology meets Physiology”, a Gordon Grigg festschrift, edited by Lyn Beard,
Daniel Lunney, Hamish McCallum and Craig Franklin. Australian Zoologist Vol 35 (2) 2010.
Long-term ecological research in Australia
forest-veg/research-sites) which presents considerable
deficiencies in providing information critical for
efficient environmental reporting across Australia.
This shortcoming within the Australian network
requires urgent attention and we suggest that the
approach outlined in this paper presents a potential
solution to this. The need for a more strategic view of
long-term ecological research and monitoring is not
restricted to Australia and we include examples from
Brazil to demonstrate how these long-term objectives
can be met.
We believe that there are three key strategies to
increasing the efficacy of long-term research and
monitoring programs. Firstly, we need to establish
improved linkages between science and management
in a systems approach that enhances sustainable
resource management (Bosch et al 2003). Secondly,
research and monitoring needs to occur over long
temporal scales to enable the detection of trends
in condition which are independent of any human
interventions. Thirdly, a combination of structural and
functional ecosystem components must be monitored
to discern environmental trends. For example, the
Environmental Change Network in the United
Kingdom has used indicator groups (e.g. butterflies,
moths and beetles) to monitor changes in biodiversity
in response to climate change (DEFRA 2003). Such
long-term ecological data are necessary for natural
resource management actions, such as condition
assessment, impact assessment, population estimation,
planning and modelling, and are dependent on the
rapid dissemination of the monitoring information to
a multitude of stakeholders.
Long-term ecological data collection and use
provides the foundation of ecological research and
understanding, yet it remains an area characterised by
minimal resources, ad hoc planning and is captive to
short-term thinking. Despite the imperative for longterm ecological data, shortcomings in this information
are increasingly being highlighted within Australia
(e.g. NLWRA 2002; Productivity Commission 2004)
and globally (e.g. Pereira and Cooper 2006). The
National Land and Water Resources Audit’s (NLWRA)
Australian biodiversity assessment concluded that “a
strategic and systematic approach to monitoring and
reporting on Australia’s terrestrial biodiversity requires
a strategic analysis of the existing database in order
to define and clarify information needs and link to
other datasets” (p.186) to balance demands on natural
resources. However, despite a number of subsequent
reviews commissioned by the NLWRA (2004a; 2004b)
these analyses are mostly focussed on continuous map
coverage and remotely sensed imagery of a region to
map vegetation patterns, rather than site-based data
which provide direct measures of change. These site
specific measures of change are critical to developing
an understanding of the trends in condition as remote
methods are frequently incompatible (Pereira and
Cooper 2006) and are also prone to classification and
interpretation errors (Thackway et al 2007).
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Complimentary long-term ecological
research: speaking from the same
ecological page
The use of long-term ecological research sites to monitor
changes in biological condition at local, regional and
global scales is appropriately argued (Hobbie et al 2003;
Parr et al 2003) but considerable debate remains as to
the appropriate measures of such biodiversity within such
networks. This symptomatic need for appropriate indicators
from long-term ecological research sites is demonstrated by
the variation in vegetation condition assessment metrics
within Australia. A number of Australian States have
developed condition assessment approaches to evaluate
broadscale trends in biodiversity condition. The first,
and most well known, of these is the Victorian ‘Habitat
Hectares’ approach which is founded upon comparisons
between existing vegetation and benchmark sites of the
same ecological community in a mature and undisturbed
state. A suite of ten habitat attributes are used to prioritise
conservation interventions (Parkes et al 2003; McCarthy
et al 2004). Similar approaches are being developed
and applied in other States, such as ‘BioCondition’ in
Queensland (Eyre et al 2006) and ‘BioMetric’ in New
South Wales (Gibbons et al 2005). Criticism is increasingly
being directed at these approaches with regard to perceived
errors, inconsistencies and lack of detail. Resolution of
such problems is hampered by inadequate spatial and
temporal data. A well planned network of long-term
research sites across the landscape would be an invaluable
asset to assessing, comparing and refining the multitude
of condition assessment approaches at such sites over
time. Biodiversity condition, and the ecological data that
underpins it, are also assuming increased importance
within the Australian Government (e.g. DEH 2005).
Understanding and tracking these changes in ecological
condition and understanding the key influences will be
very important, particularly in establishing ecosystem
thresholds, deciding when management interventions are
justified, monitoring changes resulting from management
activities, and the legal enforcement of such actions.
Long-term ecological research sites are necessary to
understand and manage ecosystems and Westoby (1991)
has urged greater cooperation and research funding
incentives to establish and maintain such sites across
Australia. Numerous Australian organisations have (or
have had) such sites used for many purposes such as
fire management, forestry monitoring (e.g. EPA 1999),
grazing (e.g. Sinclair 2005) and biodiversity monitoring
(e.g. Neldner et al 2004), which could potentially be
exploited for broader ecological research. However,
the question-specific design, poor awareness, and the
limitations of data and sampling methodologies, often
limit the wider use of such datasets. For example,
such site-based sampling can often have inadequate
replication to statistically examine patterns or trends
across the landscape (Lawson et al 2007). As a result these
isolated sites are poorly comparable and do not therefore
contribute to our understanding of ecological processes.
Gioia’s (2005) assessment of information management
in State and Commonwealth conservation agencies
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concluded that these “sites of significance” were of “high
strategic significance” (p.27) to biodiversity information
systems. He recommended clear identification of these
sites and a description of their purposes and attributes
(e.g. managed research plot, long-term monitoring)
within database systems as vital to their effectiveness.
Such a database would be a highly useful starting point
for a fundamental reconsideration and restructure of how
we collect and use ecological data. In addition, a parallel
process of metadata enhancement is needed to enable an
assessment of data compatibility and complementarity.
Given the variation in such sites between agencies
and States, and the imperative for cost effective use
of survey resources (Burbidge 1991; Gardner et al
2008), there exists a need for an audit of these sites to
understand their characteristics and to maximise their
utility for ecological understanding. Such audits have
been undertaken in other countries to provide the basis
of long-term ecological research (Chapman and Busby
1994). Analysis from the Eden region of southern NSW
showed some analyses were not sensitive to variations
in sample size between 0.04 and 0.1 hectare (Keith and
Bedward 1998), suggesting that there is some scope
for useful comparison and analysis of sites with varied
collection methods, albeit with appropriate checking
of data comparability. Any review should include sites
established for a variety of purposes to determine the
suitability of their information.
Across the globe many long-term monitoring programs have
been initiated (Wiser et al 2001; Craine et al 2007) although
not all of these are affiliated to the ILTER network. Many
of these are in regions recognised for their high biodiversity
but much of this is relatively poorly understood (e.g.
Amazonia in Brazil, Magnusson et al 2008). Many studies
have focused on a limited range of taxa, or only abiotic
processes, and have widely differing sampling methods
which limit their comparability. In some cases, the logistics
entailed in regularly resurveying the sites inhibits their
wider application (e.g. Tropical Forest Census Plots, Condit
1995, 1998, Magnusson et al 2008).
These challenges have prompted a review of the approaches
to long-term ecological research and monitoring (Strayer
et al 1986, Ferraz et al 2008) facilitating the development
of new approaches such as the Program for Planned
Biodiversity Ecosystem Research in Brazil (see reviews by
Magnusson et al 2005, 2008). Faced with the challenges
of ensuring that long-term ecological research should
contribute to biodiversity conservation in a coordinated
manner, we will outline options for how such long-term
ecological research could be achieved in Australia.
Advancing long-term ecological
research and monitoring within
Australia
Site-based ecological data has many possible applications,
the scope of which is dependent upon the quality and range
of information recorded (Neldner et al 2004). However,
these site based approaches have a number of shortcomings
and Ferrier (1997) summarised data gaps into three
categories, and provides the reasons for them:
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• geographical gaps: only a portion of a region can
realistically ever be sampled.
• temporal gaps: one-off and short duration surveys don’t
adequately describe temporal change.
• taxonomic gaps - not all biodiversity elements are
sampled each time.
Burbidge (1991) has concluded that the paucity of
basic information on the distribution of most taxa
across Australia necessitates well-designed surveys
serving multiple objectives to achieve scientifically
sound nature conservation surveys in a cost-effective
manner. The need for these baseline assessments is
reiterated not only by the scientific community but also
by managers. Worboys (2007a) assessed the responses
by protected area and natural resource managers
and found that there was an overwhelming need
for assessing management performance in response
to established baselines. These contextual baseline
conditions (fauna, flora, habitats, ecosystems etc.) are
critical for benchmarking and inclusion in the adaptive
management process (Worboys 2007a). How then can
this be implemented within Australia?
We believe that the implementation of a national
biodiversity research and monitoring strategy for Australia
is both achievable and imperative given the emerging
national environmental challenges. There are however, a
number of key steps to ensuring that such a system is able
to deliver on its objectives. Firstly, the network design
has to be flexible to enable support of a multi-scalar
approach. Using a multi-scalar approach caters for the
scalar variability of environmental structure and function
across the landscape and ensures the network can
monitor biodiversity at local (site), regional (landscape)
and national (biome) scales in a nested hierarchy.
Secondly, the selection of monitoring indicators needs
to be centred on a core set of variables that provide
the basic baseline data which can be supplemented
as necessary with site-specific requirements to cover
emerging research priorities. The selection of indicator
taxa that enable cost-effective monitoring has been
strongly argued and vascular plants, birds and dung
beetles are frequently identified as being of high value
(Pereira and Cooper 2006; Gardner et al 2008) but
Lindenmayer et al (2001) urge a cautionary approach
and suggest that structure-based indicators may be
more appropriate than taxon based indicators in areas
where our taxonomic knowledge is limited. Thirdly,
the survey methodologies should allow for comparable
assessment of biodiversity indicators across a range of
spatio-temporal scales. This is critical to enable the
accurate detection of trends in condition while also
being able to differentiate between trends in response
to anthropogenic versus natural drivers. Lastly, data
generated from such monitoring need to be housed in a
central widely accessible location where both scientists
and land managers can access these data in a short time
frame to facilitate adaptive management practices that
build from the learning experiences arising from the
long-term monitoring.
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Long-term ecological research in Australia
One approach that is able to meet the requirements of
an efficient long-term ecological research and monitoring
strategy across Australia, is the RAPELD approach to
standardised surveys (rapid assessment surveys at longterm ecological research sites) used by the Program for
Planned Biodiversity and Ecosystem Research (PPBio)
developed in Brazil (see Magnusson et al 2005). Similar to
Australia, Brazil is geographically a large country, has high
biotic diversity and heterogeneity, and limited resources
for monitoring. RAPELD is a universal meso-scale (>
100ha spatial extent or >1:25,000 spatial resolution, as
per Ferrari & Ferrarini 2008), multidisciplinary system
designed for cost-effective and efficient ecological
research and data collection. It provides a new model
for biodiversity research, monitoring and assessment
that can be replicated throughout Australasia, providing
an innovative foundation for enhancing environmental
management and monitoring the impacts of climate
change in the future. The approach is designed to
overcome present restrictions facing site-based
ecological data collection which are characterised by
ad hoc implementation and analysis, single purpose
aims, duplication and wasted resources, which ultimately
result in non-comparable data of limited ecological
value. As such, the PPBio program is one of the few
means of achieving these universally relevant aims in
a cost-effective framework for ecological research and
management, with the potential to also monitor social,
political and economic issues and their interactions with
environmental systems. Although some existing systems
are adequate for some taxa, or particular questions, most
are inadequate for the needs of most users (conservation
planning, environmental impact assessment, bioprospecting, monitoring of harvesting, environmental
reporting etc.). We suggest that the establishment of
a network of long-term ecological research sites along
ecological gradients in Australia using the PPBio approach
would improve the ability of scientists and managers to
report on and respond to environmental changes, most
notably the effects of climate change.
PPBio aims to assist agencies and land managers in
collecting long-term data on biodiversity and ecosystem
assessment on public and private lands. The program
includes a number of important components:
1. The system is based on permanent plots (terrestrial,
aquatic or marine) that are systematically spaced in grids
(e.g. 5 km x 5 km) and modules (e.g. 5 km x 1 km) within
a hierarchical long-term ecological research (LTER)
network (Magnusson et al 2005, Mendonca et al 2005).
This meso-scale approach facilitates the compilation of
replicated sampling of local biodiversity and biophysical
data but importantly enables the integration of these
replicate plots to improve our understanding of biodiversity
patterns across broader scales.
2. The RAPELD system is modular in its design and
although core grids within the network should adhere to
the 5km x 5km design, smaller site-specific modules (e.g. 5
km x 1 km) of both trails and plots can be used to capture
specific biodiversity features, experimental treatments, or to
sample large areas cost effectively (Magnusson et al 2005).
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3. All data collected in the plots will be publicly available on
a dedicated internet site (owned by consortium members)
together with the associated metadata so that they are
available to land managers and other scientists. Data
collectors have a two year window to publish results before
their data are released. This ensures that these data are
rapidly available to inform adaptive management responses,
while accommodating the publication needs of researchers.
The strength of the PPBio approach is that it facilitates
long-term ecological monitoring of key biotic and abiotic
variables, while serving as a hub for dynamic and diverse
ecological research responding to emerging priorities
(Magnusson et al 2008). The international network of
long-term ecological research sites focus multi-disciplinary
research on biodiversity and ecosystem processes that allow
managers to monitor both the local impacts associated
with local management practices, and the long-term
changes associated with global climate change.
The implementation of the PPBio approach is underpinned
by a robust sampling design that can be replicated in any
number of ecosystems at a global scale. This makes the
PPBio approach well suited to the Australian situation.
The RAPELD design has seven basic standards for such
ecological surveys, as outlined by the Brazilian Ministry of
Science and Technology (2006):
1. The use of standardised survey methods.
2. The use of integrated multidisciplinary surveys of all taxa.
3. The use of an area of a sufficiently large size to monitor
all taxa and ecosystem processes (terrestrial, aquatic
and marine).
4. The use of a modular design, to allow comparisons with
samples taken over larger areas.
5. The compatibility with existing programs.
6. The ability to be implemented using existing resources.
7. The timely availability of useable data to managers and
other stakeholders.
These standards underpin the success of the PPBio model.
Adopting the PPBio model within
Australia
Australian biodiversity conservation and management
currently lacks any consolidated approach to monitoring
and reporting the condition and trend in condition of
environmental variables. This is clearly indicated by the
most recent Australian State of the Environment (SoE)
report finding that 63% of SoE reporting indicators
had no or inadequate data to base assessments
upon (Beeton et al 2006). Existing SoE reporting is
focused on a broad scale assessment of a number of
indicators to report on trends over five year intervals
(Saunders et al 1998; ANZECC 2000) and demands
rigorous scientific monitoring to support these broad
assessments. An inability to provide accurate reports
on biodiversity condition is fuelled by the paucity of
comparable long-term studies (Westoby 1991; Hahs
2001; Hughes 2003) demonstrated by Lunt (2002)
who outlines the shortcomings of long-term vegetation
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Hero et al.
change monitoring across Australia. Few long-term
experimental studies exist and long-term changes are
derived from comparisons of independent short-term
studies prompting the need for initiatives that are able
to establish baselines for various ecosystems and their
constituent fauna and flora (Hughes 2003).
We believe that the PPBio approach can support existing
SoE reporting mechanisms through the provision of longterm landscape-level monitoring data across a network
of permanently marked sites stratified across broad
vegetation types (see Magnusson et al 2005). These
sites will incorporate a standard suite of ‘core’ biotic and
abiotic data, each resampled regularly at time frames
appropriate to each variable, to allow spatial and temporal
comparison within and between sites (Magnusson et al
2005; 2008). This would provide baseline information
for ongoing information on temporal change, and for
additional ecological research at the site. A range of
ecological research could be focused in and around such
sites, with the aim of providing information for a range of
purposes including linkage with remote sensed imagery,
vegetation mapping, condition assessment approaches,
ecological modelling, etc.
Given adequate cooperation, ‘core’ data would be
freely available to other ecological researchers using
the sites with the aims of decreasing duplication and
improving information cost-effectiveness. Historically
the limited budgets available to conservation science
have limited the availability of biodiversity data
(Balmford and Whitten 2003) as a result of surveys
being targeted to specific indicator or surrogate
species. The implementation of a truly integrated
multidisciplinary approach that fosters the involvement
of a diverse array of scientists is expected to reduce
monitoring costs as these are absorbed within
individual institutions. However despite the diversity
of interests and expertise potentially contributing to
data generation from the RAPELD grids these data
will be comparable as a result of the standardised
nature of the sampling protocols. The principles
outlined above support Westoby’s (1991) call for
greater cooperation and research funding incentives
to establish and maintain such sites.
Establishing PPBio - RAPELD longterm ecological research sites within
Australasia
The PPBio Australasia program is coordinated by the
Environmental Futures Centre at Griffith University and
is focussed on the following:
• Establishing a network of long-term ecological
research sites, that form part of the AusLTER and
ILTER networks, and are available as a tool for
resource managers and scientists globally. These sites
contribute to providing the necessary data to inform
future environmental management requirements
in the face of climate change. There may be a
number of more focused research objectives linked
to particular sites however the need for such
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rigorously defined objectives is currently under
discussion (Strayer et al 1986, Ferraz et al 2008,
Magnusson et al 2008).
• Initiating long-term ecological research sites using
RAPELD designs, with permanently marked survey
plots (now established at: Karawatha Forest Park in
Brisbane, Qld; Lake Broadwater Conservation Park
outside Dalby, Qld; and Chitwan National Park
(Nepal).
• Coordination of baseline biodiversity assessments at these
sites using vegetation surveys as a core component.
• Developing appropriate experimental designs for
collaborative projects, and compiling standardised
survey methodology for monitoring abiotic and biotic
indices of biodiversity.
• Providing internet access and database management
support facilitating the storage and dissemination of
data from a central location.
• Assisting with the analysis and interpretation of data
collected.
Establishing a network of Long-term
Ecological Research Sites
PPBio Australasia follows the RAPELD grid and
plot design (described above, and in Magnusson et
al 2005; 2008) and has initiated the establishment of
these grids at two locations in Queensland and one
in Nepal. The first key step is the position of the grid
within the landscape of interest. This is undertaken in
a consultative manner between scientists and natural
resource managers, generally seeking to sample the
longitudinal, latitudinal and altitudinal gradients with
attention to threatened species or ecosystems. The
actual grid position on the site is determined using
GIS mapping overlays, with the positioning of the
grid maximising the number of plots and avoiding
any large infrastructure such as roads and or buildings
(Figure 1). Additionally or alternatively, modules
(grids smaller than 5 x 5 km, with smaller numbers of
plots) can be used to incorporate additional habitats
or land uses if required (e.g. vegetation types, corridors
or areas under specific management regimes), or
to obtain representative coverage of larger areas.
The grid is preferably marked as a system of trails
(Magnusson et al 2005), or virtual trails (followed by
researchers using a GPS and/or compass).
Standardised RAPELD plots are generally placed at 1km
intervals, evenly distributed along the 5 x 5 km grid
(Magnusson et al 2005). Individual plots start midway
between trail intersections (Figure 2). The 1km spacing
is designed to promote independence of data between
plot locations although grids with smaller intervals are
possible and can be used to test for spatial independence
among plots but also finer scale ecological processes. Each
250m plot midline is permanently marked with a metal
stake every 10m (Figure 3a). Trees closest to the start
and finish of the midline are marked with 2 thin bands of
clear reflective paint (Figure 3b) while trees within 2m of
the permanent stakes are marked with a single thin band
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Long-term ecological research in Australia
Figure 1. Location and layout of PPBio RAPELD grids established in Queensland at Lake Broadwater (Dalby Shire),
with 19 plots at 1km intervals, and at Karawatha Forest Park (Brisbane City) with 33 plots at 500m intervals. Plots are
represented by yellow circles.
(Figure 3c). Clear reflective paint is a subtle indicator of
the plot locations that is barely visible during daylight
hours but facilitates nocturnal research activities. Plot
midlines and stake positions are recorded at 50m intervals
along the midline using a handheld GPS.
Plot midlines follow topographical contours such that all the
permanent markers are at the same altitude. The starting
direction for each transect is arbitrarily determined to be in
an easterly or westerly direction (depending on the position
of the grid in relation to anthropogenic disturbances). Each
centre line is a series of straight 10m sections (Figure 4) with
the position of each stake accurately determined by using a
laser level and a 10m chain. If the transect bisects a road
(or any other anthropogenic disturbance) it is stopped and
restarted on the other side of the road with a 10m buffer
zone on either side of the disturbance. This plot design
minimises within plot altitudinal, edaphic, topographic,
and plant structure and composition variability (Costa et
al 2005) and facilitates orthorectification and validation
of satellite imagery, such as digital elevation modelling
(SRTM) and forest structure assessment (LIDAR). Aspect
is measured by taking a compass bearing looking down the
slope, while slope is measured with a clinometer along a
5m strip centred on the midline and perpendicular to the
elevation contour.
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Figure 2. Illustration of the standard PPBio RAPELD grid
system with plot midlines shown to follow contours
between a 1km by 1km system of walking trail.
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Data Collection and Biodiversity
Monitoring
This section focuses on the value of the PPBio
network of RAPELD grids as long-term ecological
research sites for monitoring biodiversity and
ecosystem processes; however these sites are also able
to facilitate integrated studies from other disciplines
including socio-economic analyses. One of the
strengths of the approach is that it enables managers
to relate biodiversity management issues directly with
associated socio-economic constraints. Any number of
biodiversity or biophysical variables may be recorded
on each plot within a grid, only limited by funding
and scientific resources. Standard measures during
plot establishment include aspect and slope recorded
every 50m along the midline (6 measures per plot) and
summarised as plot averages.
Plot width varies to suit the taxon or abiotic variable
being examined. Small and/or numerous taxa are
surveyed in narrow plots (e.g. reptiles or herbs and
grasses are within a 2m strip on one side of the midline)
while wide plots are used for larger or more dispersed
organisms (e.g. large trees or small mammals). Low
density species and additional environmental variables
are monitored using the larger series of grid trails
(e.g. hollow trees, large mammals) using standard
distance sampling methodologies and determination
of detection functions for specific taxa (Buckland et
al 1993, 2004) which will be a function of vegetation
density.
Figure 3. (a) Example of a tagged metal stake used to identify the location of the 10m intervals along the plot midline.
(b) Marking of trees to identify the start and end of the 250m plot midline. The tree nearest to the starting point is
marked with a double ring, (c) The tree nearest to each 10m peg along the midline. Trees are marked using reflective
paint that is discreetly visible during daylight hours and facilitates nocturnal research activities, and (d) Example of an
aluminium tag used to mark individual trees over 1cm DBH and placed at 140cm above ground level.
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Long-term ecological research in Australia
Figure 4. Illustration of the RAPELD plot design. The midline is marked with metal stakes at 10m intervals (represented
by yellow circles). Lines represent variable width of the plot in response to the size (DBH for vegetation) and or density
of the organism being measured.
One of the core variables for monitoring of the PPBio
grids is vegetation condition. As part of the initial
setup at Karawatha, we individually tagged (Figure
3d), identified, measured (DBH at 1.3m), and mapped
(distance along the plot midline and perpendicular
distance away from the plot midline) all woody stems
(trees and shrubs) with DBH>1 cm within plots.
A hierarchical design was used to sample trees of
different size classes in order to estimate tree density
in each plot (Figure 4). Large trees (DBH ≥ 30cm)
were sampled to 20m either side of the midline (40m
x 250m ≈ 1ha). Trees with DBH ≥10cm were sampled
within 10m either side of the midline (20m x 250m
≈ 0.5ha). Trees with DBH ≥1cm were sampled along
a 4m strip on the RHS of the midline (4m x 250m ≈
0.1ha). Each plot varies slightly in area because of
differences in the midline trajectory (which follows
the contour line), and the area is calculated in a
GIS program using the appropriate buffer width.
To minimise trampling disturbance resulting from
accessing the plots within the grid, a 2m buffer strip is
retained along the plot midline (1m on either side).
2010
Storage and dissemination of data
All data collected during surveys will be publicly available
on a dedicated internet site (http://www.griffith.edu.au/
ppbio) together with the associated metadata, for use by
land managers and other scientists alike. Data owners
are required to present their metadata at the start of
their projects to enable others to replicate protocols at
additional sites if necessary, and may take advantage of
a two year window to publish results before these data
are released to the wider scientific community. This
protocol aims to avoid the loss of plot data through poor
record keeping and/or the hoarding of data, and thereby
maximise the availability of quality long-term data.
Current PPBio activities in the
Australasian region
The PPBio Australasia program began in 2006 and we
have now initiated RAPELD grids with permanent
plots at Karawatha Forest Park (KFP) in Brisbane,
Lake Broadwater Conservation park in Dalby Shire,
Queensland, Australia, and internationally at Chitwan
Australian
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Hero et al.
National Park in Nepal. Herein we briefly describe
each of these initiatives to demonstrate the flexibility
in the modular strategy used to collect systematic and
comparable data within and among sites.
The first Australian PPBio site was established
in collaboration with Brisbane City Council, South-
east Queensland Catchments and the Nature Refuge
Landholders Association in January 2007. The size and
location of the reserve within an urban matrix necessitated
a reduction in the standard 1km spacing of plots to 500m
intervals resulting in 33 plots (Figure 5). Initial data
analysis from the core vegetation surveys suggests there is
Figure 5. Illustration of PPBio plot midlines following the contours of Karawatha Forest Park, Brisbane, QLD.
98
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Zoologist volume 35 (2)
2010
Long-term ecological research in Australia
little spatial pseudoreplication even at this finer scale, and
presents an ideal opportunity to examine the influence of
scale on long-term ecological data sets. The first series of
ecological baseline projects were initiated during 2007 and
included assessments of soil characteristics, fire history,
aspect, slope, vegetation structure and composition,
and relative densities of reptiles, amphibians and birds.
Although completed as a series of individual projects,
the systematic and standardised nature of these surveys
will enable us to examine the interactions allowing us to
investigate ecosystem processes at the meso-scale (e.g.
influence of fire on vegetation and reptile communities).
Two PhD projects are now examining “Sustainable
Indicators for Terrestrial Ecosystems” (SITEs including
fauna, flora and abiotic indices) and “Predicting and
Measuring the Impact of Climate Change on Frogs of
South-east Queensland”.
In September 2007, a second grid was established at Lake
Broadwater, near Dalby in Southern Queensland. Here a
5 x 6 km grid was overlaid across the reserve to capture
19 plots at 1km intervals (Figure 1) including riparian Red
Gum forest, Pilliga forest, Brigalow and grassland habitats.
Five plots were established during an undergraduate
“Conservation Biology” field trip and an additional 14
plots are planned for subsequent field trips. A core series
of vegetation and fauna surveys have also been initiated.
In December 2007 we also initiated a PPBio - RAPELD
grid in Chitwan National Park in southern Nepal in
collaboration with World Wildlife Fund Nepal, the National
Trust for Nature Conservation (NTNC), the Department
of National Parks and Wildlife Conservation (DNPWC)
and Tribhuvan University. Research is facilitated by local
scientists (universities, institutes of higher education and
research centres). At Chitwan, a standard RAPELD 5 x
5 km grid has been identified, and includes 30 plots at
1km spacing within riparian forest and grassland along
the Rapti River floodplain, and in the Sal forest of the
adjacent Churia Hills (Figure 6). The first 5 plots were
established during a pilot study in December 2007.
The variation in the application of the PPBio grid and
plot system demonstrates how the modular system can
be flexible to suit the scale of the project and the physical
constraints of the landscape. Despite changes in scale
(reduced to 500m intervals at Karawatha) and the number
of plots reduced to 19 at Lake Broadwater, the core
elements of the program (e.g. 250m plots following the
isoclines, replication of plots, etc) remain unchanged. This
enables us to use the same sampling techniques (metadata
and sampling protocols available on the internet site) and
collect comparable relational data sets from all sites.
Figure 6. Location of PPBio RAPELD plots in Chitwan National Park, Nepal, with 30 plots at 1km intervals.
2010
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The PPBio Australasia vision
The aim of PPBio Australasia (as part of the international
PPBio program) is to establish PPBio - RAPELD grids
and/or modules in all of the major biogeographic regions
throughout eastern Australia. We are currently preparing
three proposals to establish a network of RAPELD
grids following longitudinal, latitudinal and altitudinal
gradients in eastern Australia (Figure 7).
1. The first proposal includes a minimum of 8 RAPELD
grids linked to the Great Eastern Ranges Initiative
(formerly A2A Connectivity Conservation Project,
Worboys 2007b) spanning from the Alps to Atherton
to include climate refuge areas. These sites would
include modules crossing the Great Dividing Range,
with permanently marked plots at every 200m of
elevation to detect potential biome shifts in response
to climate change.
2. The second proposal includes a combination of PPBio
- RAPELD grids and modules following an east - west
longitudinal / rainfall gradient from Brisbane (existing
Karawatha grid) extending westward into the arid
region of central Australia to detect potential biome
shifts in response to climate change.
3. The third proposal includes a minimum of 20 PPBio
- RAPELD modules in coastal heath sites between
Jervis Bay in NSW and Fraser Island in Queensland to
monitor coastal systems in response to climate change.
Within each site a minimum of 4 plots will be placed
within waterbodies (coastal wetlands) with adjacent
terrestrial plots to monitor terrestrial vegetation.
Implementing a network of PPBio - RAPELD grids
throughout Australasia will allow us to measure Sustainable
Indicators for Terrestrial Ecosystems (collected by local
research organisations with an emphasis on involving
postgraduate students from local tertiary institutions) that
can provide long-term, comparable data that will be suitable
for incorporating into State of the Environment Reporting
at all levels of government (local, state and federal).
Figure 7. Graphic representation of the vision for PPBio
Australasia: to establish RAPELD LTER grids in major
biogeographic regions throughout Australia.
Acknowledgements
The success of the PPBio project lies in its broader support
base and research network. PPBio Karawatha could not
have been initiated without financial support from Brisbane
City Council (BCC), South East Queensland Catchments
Inc. and Griffith University. Logistic support was also
provided by the Nature Reserve Landholders Association
(NaRLA) and the Australian Conservation Volunteers and
staff from BCC Biodiversity Planning and BCC Natural
Area managers. Furthermore, the dedication and hard
work of Griffith University staff and students, and the many
volunteers, have been pivotal to the projects success, and
will continue to be so into the future. Special thanks to
Gordon Grigg and Lyn Beard for organising and inviting us
to participate in the Ecology meets Physiology Conference.
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Australian
Zoologist volume 35 (2)
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Au s tr al i a n
Zoologist
Ecology meets PhysiologyA Gordon Grigg festschrift
Edited by Lyn Beard, Daniel
Lunney, Hamish McCallum
and Craig Franklin
Royal Zoological Society of New South Wales
Volume 35 Number 2
2010