Journal of Molecular
Endocrinology
Y Yang et al.
Mammalian early genital ridge
development
62 :1
R47–R64
REVIEW
The molecular pathways underlying early
gonadal development
Yisheng Yang, Stephanie Workman and Megan J Wilson
Department of Anatomy, School of Biomedical Sciences, University of Otago, Dunedin, New Zealand
Correspondence should be addressed to M J Wilson: meganj.wilson@otago.ac.nz
Abstract
The body of knowledge surrounding reproductive development spans the fields of
genetics, anatomy, physiology and biomedicine, to build a comprehensive understanding
of the later stages of reproductive development in humans and animal models. Despite
this, there remains much to learn about the bi-potential progenitor structure that the
ovary and testis arise from, known as the genital ridge (GR). This tissue forms relatively
late in embryonic development and has the potential to form either the ovary or testis,
which in turn produce hormones required for the development of the rest of the
reproductive tract. It is imperative that we understand the genetic networks underpinning
GR development if we are to begin to understand abnormalities in the adult. This is
particularly relevant in the contexts of disorders of sex development (DSDs) and infertility,
two conditions that many individuals struggle with worldwide, with often no answers as
to their aetiology. Here, we review what is known about the genetics of GR development.
Investigating the genetic networks required for GR formation will not only contribute to
our understanding of the genetic regulation of reproductive development, it may in turn
open new avenues of investigation into reproductive abnormalities and later fertility
issues in the adult.
The distinction between sexes is one of the most obvious
examples of dimorphism in the animal kingdom and
highlights one of the most crucial fate decisions made in
utero to develop as a male or a female. This fate decision
to follow either developmental trajectory is an essential
process that determines the reproductive success of all
sexually reproducing animals (Fig. 1). There are a number
of different mechanisms underlying sex development
that can be broadly categorized as either genetically
sex determined or environmentally determined (Capel
2017). Typically, mammals fall within the genetically sexdetermined category. Traditionally, sexual development
has been viewed as two distinct processes, gonadal sex
determination (decision of the gonad to become a testis
or ovary) and sexual differentiation (establishment of
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Key Words
f gonad
f urogenital ridge
f disorders of sex
determination
f infertility
f molecular genetics
Journal of Molecular
Endocrinology
(2019) 62, R47–R64
testicular/ovarian structures, accessory sex structures and
secondary sexual characteristics), whereby genital ridge
(GR) formation was included only as a step in gonadal sex
determination or excluded from the broader picture all
together. The focus of this review is formation of the GR
in mice and humans, and consequences of failure of its
development, rather than sex determination, which has
been reviewed extensively elsewhere (Greenfield 2015,
Capel 2017).
Genital ridge formation
The mammalian GR is derived from intermediate mesoderm as paired structures that lie on either side of the dorsal
mesentery in the coelomic cavity (Fig. 2). Formation of
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Journal of Molecular
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Y Yang et al.
Figure 1
Summary of the origin of reproductive tissues within the mammalian
embryo. The gonad region of the GR develops into either the testis or the
ovary depending upon expression of the Sry gene. In XY gonads, the
Leydig cells produce testosterone, required for the masculinization of the
genitalia and maintenance of the mesonephric duct. Sertoli cells secrete
AMH, resulting in the degradation of the paramesonephric (Müllerian)
duct. In the absence of androgens, the paramesonephric duct develops as
the uterus, uterine tubules and upper portion of the cervix. Female
genitalia are also formed from the genital tubercle, folds and swellings.
Post-natal oestradiol synthesis by the ovary is important for the final
maturation of the oocytes and secondary sex characteristics. Other
tissues of the body also show sex-dimorphic gene expression such as the
brain and liver, under the influence of steroid hormones and other
gonadal factors such as AMH (Yang et al. 2006, Wang et al. 2009, Conforto
& Waxman 2012, Wittmann & McLennan 2013, Maekawa et al. 2014).
the mammalian GR begins with increased proliferation
of coelomic epithelial cells on the ventromedial surface
of the mesonephroi. Each mesonephros also contains the
mesonephric duct (also known as the Wolffian duct), a
primordial urogenital tissue that will give rise to the male
epididymis, vas deferens and seminal vesicles following
male sex determination (Hannema & Hughes 2007, Shaw
& Renfree 2014). In addition, the paramesonephric duct
(also known as the Müllerian duct) is also present in the
mesonephros, running in parallel to the mesonephric duct
(Fig. 2A). This is the female equivalent to the mesonephric
duct, which will form the fallopian tubes, uterus and part
of the vagina following female sex determination (Acien
1992). Together, the mesonephros and GR are known as
the urogenital ridge (UGR).
Proliferation of the coelomic epithelial cells on the
ventromedial surface of the mesonephros creates a dense,
pseudostratified epithelial cell layer (Gropp & Ohno 1966,
Pelliniemi 1975, Wartenberg et al. 1991). Alongside the
proliferation of the coelomic epithelium, the underlying
basement membrane becomes fragmented, allowing
many epithelial cells to ingress dorsally, towards the
mesonephros (Fig. 2B) (Karl & Capel 1998, Kusaka et al.
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development
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2010). As these cells delaminate from the coelomic
epithelium, they undergo an epithelial-to-mesenchymal
transition (EMT) (Kusaka et al. 2010) and as mesenchymal
cells, begin to populate the space between the coelomic
epithelium and the mesonephros (Karl & Capel 1998,
Schmahl et al. 2000). These mesenchymal cells of the
GR are precursor cells that can differentiate into somatic
support cells and interstitial/stromal cell lineages of the
early sexually differentiated gonad (Karl & Capel 1998,
Ito et al. 2006, Mork et al. 2012).
In the testis, additional cells are also recruited into
the GR region from the mesonephros to augment the
population of mesenchymal cells. Cell-tracing and organ
culture studies in mice revealed that these largely contribute
to the endothelial cell population for the establishment of
the male vascular system (Karl & Capel 1995, Martineau
et al. 1997, Coveney et al. 2008). Migrating into the GR
Figure 2
Schematic illustrations of the structures and components involved in early
UGR development in mice. (A) (i) Side view of a E11.5 embryo indicating the
location of the developing GR (orange bar). (ii) A ventral view of the
abdominal region focuses on the mesonephros (white) and the gonadal
ridge (grey) that develops on the ventromedial surface. The aorta is shown in
red. (iii) In transverse sections the mesonephros, containing mesonephric
and paramesonephric ducts, are often visible. The gonad appears as a bulge
facing into the coelomic cavity. At this stage, the PGCs have migrated into the
GR, from the hindgut via the dorsal mesentery. (B) Starting at E9.5, the
coelomic epithelium (yellow) on the ventromedial surface of the
mesonephros begins to proliferate, forming a pseudostratified epithelial
layer. The basement membrane becomes fragmented, allowing GR
progenitor cells that have undergone EMT to migrate inward. These cells
continue to proliferate, just behind the coelomic epithelium to form the
bi-potential gonad. Between E10.0 and 11.5, the PGCs (green) also migrate
into the GR. CE, coelomic epithelium; DM, dorsal mesentery; GC, germ cells;
GR, genital ridge; HG, hindgut; M, mesonephros; MD, mesonephric duct; MT,
mesonephric tubule; PGC, primordial germ cell; PMD, paramesonephric duct.
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Y Yang et al.
just prior to gondal sex determination are primordial germ
cells (PGC), the precursors to the germ cells that become
sperm and oocytes later in life. PGCs arise near the yolk
sac and travel, via the hindgut, to the GR as a result of
chemotaxis (Doitsidou et al. 2002).
Genital ridge formation in mice
Most of the work investigating mammalian gonad
development has been performed on mice. It is assumed
that events in the human embryo, as well as other
Eutherian mammals, follow the same basic pattern, albeit
with some differences in the timing and anatomy.
The process of GR formation, starting with the
proliferation of the coelomic epithelium, begins at about
E9.5 in mice (Hu et al. 2013), which equates to about
5 weeks of gestation in humans (Jost 1972). The GR
itself is not morphologically evident until about E10.0–
10.5 where a clear distinction between the GR and the
mesonephros can be seen under light microscopy. From
E10.5 to 11.5, further proliferation of the GR coelomic
epithelium and mesonephros expands the overall size
on the ventral side of the mesonephros (Fig. 2A). The
initiation, proliferation and expansion of the GR is
indistinguishable between XX and XY embryos, and
the size of the GR is determined by the length of the
embryonic trunk (Wainwright et al. 2014). At around
E11.5–12.0, the molecular events that determine gonad
fate occur, prompting the gonad to follow either a testisor ovary-specific developmental trajectory from this
time-point. The first sign of sexual dimorphism of the
early differentiated gonad becomes evident in XY gonads
at about E12.5, when testis cords can be seen (Hacker
et al. 1995, Schmahl et al. 2000).
The GR is not only a progenitor tissue for the
gonad, but also the adrenal cortex, a critical endocrine
tissue that synthesizes and secretes a variety of steroid
hormones to maintain body homeostasis and regulate
the stress response (Yates et al. 2013, Walczak &
Hammer 2015). Consequently, several genes required
for gonad development are also important for adrenal
gland development (Luo et al. 1994, Gut et al. 2005,
Katoh-Fukui et al. 2005, Bandiera et al. 2013, Tevosian
et al. 2015). The medulla and the cortex of the adult
adrenal gland have separate origins; the medulla is
derived from neural crest cells, whereas the cortex is
derived from cells located at the anterior-most region
of the GR, indicating it has an intermediate mesoderm
origin (Hatano et al. 1996). Beginning at E10.5, a small
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Mammalian early genital ridge
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62 :1
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cluster of cells at the anterior region of mesenchyme
separates from the GR primordium and moves dorsomedially to form the adrenal anlage (Hatano et al.
1996, Val & Swain 2010). From E11.5 to 12.5, neural
crest cells invade the adrenal anlage and aggregate in
the centre to form the medulla. Mesenchyme cells,
hypothesized to be of a coelomic epithelial origin,
form a fibrous capsule around the composite adrenal
primordium by E14.5 (Xing et al. 2015).
Development of the PGC in the Genital ridge
As previously mentioned, PGCs originate from a separate
location near the yolk sac, away from the mesonephros
and GR (Saga 2008). Mammalian PGCs are specified via
an inductive system of signalling molecules, particularly
BMP4. In mice, PGCs are induced around E6.5 (equating
to approximately 2 weeks gestation in humans) from
the proximal epiblast by BMP4 signalling (Lawson et al.
1999). These cells subsequently move to and cluster at
the base of the allantois/yolk sac wall, near the forming
hindgut, which can be seen in mouse embryos at about
E7.0 (week 3–4 human gestation) as a small population
of ~45 cells (Lawson et al. 1999). As development
proceeds, the hindgut folds and the PGCs migrate
into the embryo proper (Hara et al. 2009, Harikae et al.
2013). By E9.5 the PGCs begin to migrate away from
the hindgut towards the UGR and colonize the gonad
between E10.0 and 11.0 (~5-week gestation in humans)
(Fig. 2A; Witschi 1948, Molyneaux et al. 2001). During
this mass migration of PGCs, the hindgut descends into
the coelomic cavity and the last PGCs to migrate must
travel through the dorsal mesentery before entering the
gonads (Molyneaux et al. 2001).
The PGCs undergo several rounds of cell division to
achieve a population of about ~3000 cells by ~E11.5 (Tam
& Snow 1981). Around this time, PGCs begin to undergo
a process known as licensing, undergoing a global
change in gene expression, turning on genes required
for gametogenesis, concurrently switching off their
pluripotency genes over the course of the following days
(Stebler et al. 2004, Gill et al. 2011, Rolland et al. 2011,
Seisenberger et al. 2012). Following this transition, the
PGCs are referred to as gametogenesis-competent cells and
are poised to initiate either male or female differentiation,
including meiosis, upon receiving cues from the somatic
cells of either the forming testis or ovary and the nearby
mesonephric tissue (McLaren & Southee 1997, Adams &
McLaren 2002, Gill et al. 2011).
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Y Yang et al.
Mammalian early genital ridge
development
Genes essential for initial gonad formation
Mutational analysis using the mouse model, with some
additional evidence from human clinical cases, have
brought to light a number of genes that are required to
initiate the formation and proliferation of the GR, as well
as testis/ovary differentiation (Table 1). These include
Wilms’ tumour suppressor 1 (WT1) (Kreidberg et al. 1993,
Hammes et al. 2001), LIM homeobox gene 9 (LHX9)
(Birk et al. 2000), Nuclear Receptor Subfamily 5 Group
A member 1 (NR5A1; also called steroidogenic factor 1
(SF1)) (Luo et al. 1994), empty spiracles homeobox gene
2 (EMX2) (Miyamoto et al. 1997) and GATA-binding
protein 4 (GATA4) (Hu et al. 2013). In mouse embryos,
a homozygous null mutation in any one of these genes
causes gonadal agenesis. While the function of these five
Table 1
62 :1
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factors have mainly been characterized in mice, mutations
in three of these genes (NR5A1, WT1 and GATA4) have also
been found in patients with DSD, indicating a conserved
role in reproductive development (Bashamboo et al. 2010b,
Kohler et al. 2011, Lourenco et al. 2011, Swartz et al. 2017).
However, these genes are expressed and function in many
developing organ systems, meaning the loss of function
in both mice and humans produce a range of phenotypes
beyond the reproductive tract (Ingraham et al. 1994,
Klamt et al. 1998, Hammes et al. 2001, Tevosian et al.
2015). Genes known to be required for GR development
often show altered expression in gene knockout lines,
indicating a co-regulatory relationship exists between
these critical factors (discussed further below).
It is evident that many of these critical early factors
discussed below have multiple roles in reproductive
Summary of genes essential for GR formation.
Gene
Mouse UGR expression
Mouse gonadal phenotype
Human phenotype
WT1
Expressed in the coelomic
epithelium and mesonephros
(Armstrong et al. 1993)
Frasier syndrome (Klamt et al. 1998)
WAGR syndrome (Le Caignec et al. 2007)
Denys-Drash syndrome (Hastie 1992),
Meacham syndrome
Phenotypes include streak gonads,
ambiguous genitalia, hypospadias, 46,
XY sex reversal (Suri et al. 2007)
Nr5a1
Initially expressed in the anterior
region of the coelomic epithelium.
Expression domain expands in an
anterior–posterior direction (Hu
et al. 2013)
Degenerating gonad due to
increased apoptosis (Kreidberg
et al. 1993, Hammes et al. 2001)
Male WT1-KTS mice exhibit complete
sex reversal (Hammes et al. 2001)
Following sex determination, roles in
ovary and follicle development
(Gao et al. 2014)
Gonad regression due to increased
apoptosis
Loss of adrenal development,
obesity and pituitary abnormalities
XY KO mice show complete male-tofemale sex reversal (Luo et al. 1994,
Shinoda et al. 1995)
Emx2
Lhx9
Gata4
MAP3K1
Range of phenotypes including 46, XY
sex reversal, gonad dysgenesis, male
infertility, hypospadias, adrenal
insufficiency, gonad dysgenesis,
premature ovarian failure (reviewed in
Ferraz-de-Souza et al. 2011)
46, XX sex reversal, ovotestis
(Bashamboo et al. 2016, Swartz et al.
2017)
Absent gonads
Endometriosis (Daftary & Taylor 2004)
Coelomic epithelium and cells that
Reduced proliferation of the coelomic Endometrial cancer (Daftary & Taylor
move into the underlying
2004)
epithelium (Miyamoto et al. 1997,
mesenchyme
Incomplete Müllerian fusion (Liu et al.
Mesonephric duct epithelia (Hu et al. Pellegrini et al. 1997)
2013)
2015)
Coelomic epithelium and cells that
Absent gonads
None reported
move into the underlying
Reduced proliferation of the
Limited evidence of involvement in
mesenchyme (Birk et al. 2000, Hu
coelomic epithelium (Birk et al.
reproductive cancers (cervical cancer
et al. 2013)
2000)
promoter methylation (Bhat et al.
2017))
Absent gonads
Testicular abnormalities, ambiguous
Coelomic epithelium, expression
No expansion of the coelomic
genitalia (Lourenco et al. 2011)
domain expands in an anterior–
epithelium (Hu et al. 2013)
Frequent mutation in ovarian cancers
posterior direction, precedes
Following sex determination, roles in (Cai et al. 2009)
expression of Sf1 (Hu et al. 2013)
ovarian and testicular development
(Efimenko et al. 2013)
Coelomic epithelium and gonad
Minor testis abnormalities (Warr
Ambiguous genitalia streak gonads
mesenchyme (Warr et al. 2011)
et al. 2011)
(Pearlman et al. 2010, Granados et al.
2017)
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development, from formation of the bi-potential gonad
of both sexes, to sex-specific roles following gonadal sex
determination. Currently, we are lacking a detailed gene
network integrating both the roles of these transcription
factors, along with the signalling pathways that regulate
them, to gain a broader picture of how these components
together regulate cellular processes like differentiation
and proliferation to control formation of the bi-potential
gonad. Future genome-wide approaches to study gene
interactions will help to better define the regulatory
interactions between these proteins, and others, required
for GR formation
Wilms tumour suppressor (Wt1)
Wt1 mRNA is expressed during gonad development
in the coelomic epithelium and mesonephros prior to
gonadal sex determination and in the progenitor support
cells of both the developing testis and ovary (Armstrong
et al. 1993). Wt1−/− mice have a recognizable gonad
primordium at E11.0, but this then degenerates due to
apoptosis of somatic cells (Kreidberg et al. 1993, Hammes
et al. 2001). Knockout mouse embryos, on a C57BL/6
genetic background, do not survive to parturition due to
embryonic lethality from heart defects, while knockout
mice generated on other genetic backgrounds, such as
Balb/c, survive until birth (Kreidberg et al. 1993, Herzer
et al. 1999).
The Wt1 gene encodes for a zinc finger transcription
factor that functions as either an activator or repressor
of transcription; however, the structure and function
of the WT1 protein varies depending on the cell type
and promoter used to transcribe the gene, RNA editing,
alternative usage of translational start sites and alternative
splicing (Bruening & Pelletier 1996, Scharnhorst et al.
1999, Dallosso et al. 2007). Of particular interest to
gonad development are two alternate splice forms of
the WT1 protein named WT1–KTS and WT1+KTS, due
to either the inclusion or exclusion of three amino
acids located between the third and fourth zinc finger
domains (Hammes et al. 2001). Mice lacking expression
of the Wt1(−KTS) isoform have gonads markedly reduced
in size and poorly differentiated (Hammes et al. 2001),
suggesting that WT1(−KTS) is the isoform required for the
proliferation and differentiation of GR cells. Knockout of
the Wt1(+KTS) splice transcript leads to complete maleto-female sex reversal and reduced Sry gene expression,
yet, ovarian development proceeds normally (Hammes
et al. 2001; Fig. 3). For both knockout lines, the overall
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Figure 3
The Wt1 gene has multiple roles in gonad development and
differentiation. Two isoforms of WT1, WT1(+KTS) and WT1(−KTS) have
differing roles in gonad development based on gene-knockout studies.
Loss of WT1(+KTS) leads to reduced Sry gene expression and XY sex
reversal, in contrast, deletion of WT1(−KTS) halts GR development for
both sexes (Hammes et al. 2001). However, if both splice forms of WT1
are present until E10.5, the gonad primordium still develops but with
altered cell fate, with most somatic cells now adopting a steroidogenic cell
fate (Chen et al. 2017).
expression of Wt1 mRNA was similar to WT animals, due
to increased expression of the alternative splice form
compensating for the loss of the targeted splice form
(Hammes et al. 2001). Thus, this resulting shift in isoform
ratio (the ratio of −KTS/+KTS), leading to overexpression
of the alternative isoform, may also contribute to the
observed knockout phenotype. However, this has not
been investigated further in mice with transgenic
mouse lines. In humans, an altered splice form
ratio (increased WT1−KTS, reduced WT1+KTS isoform)
does severely affect gonadal development resulting in
Frasier syndrome with streak gonads (Barbaux et al. 1997,
Klamt et al. 1998).
More recently, Chen et al. (2017) showed that
the conditional inactivation of Wt1 just prior to sex
determination at E10.5 allows gonadogenesis to proceed
with reduced differentiation of Sertoli and granulosa cells
from somatic cell precursors. Thus, when Wt1 expression
is lost from gonads at E13.5, most somatic cells develop
into steroidogenic cell types (Chen et al. 2017; Fig. 3). In
contrast, in traditional knockout animals where Wt1 is
inactive throughout development, development of the GR
is blocked (Kreidberg et al. 1993; (Fig. 3). Thus, the role of
WT1 alters as gonad development progresses, from being
required for initial cell proliferation and growth of the
GR, predominately through the WT1(−KTS) splice form,
to controlling cell fate of somatic cells, and this is likely to
occur through direct regulation of Nr5a1 gene expression
(Fig. 4, described further in the following section).
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Figure 4
Summary of the molecular relationships during early gonad formation.
(A) Summary of relationships between the core genes necessary for GR
development. Relationships are based on previous studies using
knockout lines where expression changes of genes were observed. Loss
of expression from knockout indicated a positive regulatory relationship
and increased expression suggests a negative relationship. If direct
relationships are known, through studies such as ChIP-PCR and reporter
assays (Wilhelm & Englert 2002, Katoh-Fukui et al. 2005, Franca et al. 2013,
Chen et al. 2017), they have been indicated by a solid line. (B) Recent
studies suggest a complex regulatory relationship exist between WT1 and
Nr5a1 (Chen et al. 2017). Nr5a1 expressing cells (Nr5a1+) in the GR
contribute to the Sertoli, interstitial and Leydig cell populations following
sex determination. In the bi-potential GR, WT1 is required for Nr5a1 gene
expression. In Sertoli cells WT1 binds directly to the Nr5a1 gene promoter
and appears to reduce its expression. In Leydig cells (no Wt1 expression),
Nr5a1 gene expression is significantly higher. Lhx9 is a candidate protein
partner for WT1 (Wilhelm & Englert 2002), it is expressed in the GR, and
later in interstitial cells.
Steroidogenic factor 1 (Sf1), nuclear receptor
subfamily 5 group A member 1 (Nr5a1)
The Nr5a1 (Sf1) gene encodes a transcription factor that
is expressed in the adrenal glands, coelomic epithelium,
hypothalamus and anterior pituitary gland during
development (Luo et al. 1994, Morohashi & Omura
1996). During UGR development, Nr5a1 gene expression
is limited to the gonad primordium, where it is required
for the proliferation and survival of progenitor somatic
cells (Luo et al. 1994). After gonadal sex determination,
Nr5a1 gene expression is restricted to testis-specific
cells, namely Leydig and Sertoli cells (Luo et al. 1994).
Nr5a1−/− mice show complete failure of adrenal and
gonadal development, abnormalities of the pituitary and
hypothalamus and obesity (Luo et al. 1994, Shinoda et al.
1995). The gonads of Nr5a1-knockout mice embryos do
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not develop beyond the early GR stage, and as a result, XY
mice show complete male-to-female sex reversal (Luo et al.
1994). Gonadal regression in Nr5a1−/− embryos is due to
increased apoptosis of the somatic cells (Luo et al. 1994),
also observed with Wt1 loss-of-function mice (Hammes
et al. 2001). Recent single-cell RNA sequencing (scRNA-seq)
of XY somatic cells, expressing Nr5a1 (Nr5a1-GFP labelled
cells) prior to (E10.5) and following sex determination
(E11.5–E16.5), confirmed the presence of a multipotent
Nr5a1+ cell population in the GR that progressively forms
both the supporting and steroidogenic cell lineages from
E11.5 (Stevant et al. 2018).
Regulation of Nr5a1 gene expression plays a critical
role in gonad development, with all key transcription
factors described to date in GR development function in
regulating correct Nr5a1 expression (Fig. 4; Wilhelm &
Englert 2002, Katoh-Fukui et al. 2005, Hu et al. 2013, Chen
et al. 2017). LHX9 and WT1(−KTS) proteins both bind to
the promoter region of Nr5a1 in vitro, and together they
increase reporter gene expression in a Sertoli-like (TM4)
cell line (Wilhelm & Englert 2002), a finding replicated in
Leydig-like (TM3) and C2C12 (myoblast derived) cell lines
(Val et al. 2007, Takasawa et al. 2014). However, in primary
Leydig cells WT1 overexpression repressed Nr5a1 gene
expression. Further experiments confirmed that WT1
directly binds in vivo to the Nr5a1 promoter in Sertoli
cells obtained from 2-week-old mice (Chen et al. 2017).
It was suggested that these conflicting results were most
likely due to the use of cell lines vs primary cells in these
studies (Chen et al. 2017). The TM4 and TM3 cell lines
were derived from juvenile BALB/c mouse testis (Mather
1980) and both cell lines express a similar combination
of cell type gene markers (Beverdam et al. 2003). It is
also worth noting that Chen et al. (2017) used primary
Leydig cells obtained from adult and juvenile mice on
a mixed background (C57Bl/6:129/SvEv), given that
strain background can strongly influence the resulting
phenotypes (Herzer et al. 1999, Meeks et al. 2003, Brennan
& Capel 2004, Munger et al. 2009). WT1 also may have
differing roles in the regulation of Nr5a1 gene expression,
as the gonad develops into a testis, perhaps being required
for an initial activation of Nr5a1, with protein partner
LHX9 in the early gonad and, following gonadal sex
determination, WT1 reduces Nr5a1 expression in those
NR5A1+ cells that are fated to become Sertoli cells. In this
case, the presence or absence of certain protein partners,
for instance LHX9, would impact on how WT1 regulates
Nr5a1 gene expression. Previous studies have shown that
WT1 is converted from an activator to a repressor protein
by the protein partners such as BASP1 (McKay et al. 1999,
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Carpenter et al. 2004). Given that NR5A1+ cells contribute
to both cell populations, it maybe that Nr5a1 expression
levels determine which fate, with Sertoli cells expressing
significantly lower levels of Nr5a1 compared to Leydig
cells (Fig. 4B; Chen et al. 2017).
LIM homeobox 9 (Lhx9)
The Lhx9 gene encodes a transcription factor expressed
in a variety of regions within the developing mouse
embryo, including the brain, heart, kidney, limb buds
and the coelomic epithelium (Retaux et al. 1999, Birk
et al. 2000, Failli et al. 2000, Molle et al. 2004, Oshima
et al. 2007, Smagulova et al. 2008, Tzchori et al. 2009,
Yang & Wilson 2015). Lhx9 gene expression in the UGR
is first seen in the coelomic epithelium at E9.5 and later
in the gonad primordium, until sexual differentiation
where its expression becomes restricted to the interstitial/
mesothelial regions of testes and the cortical regions of
ovaries (Birk et al. 2000). Lhx9−/− mutant mice exhibit a
similar gonadal phenotype to that of Wt1(−KTS) −/− mice,
whereby normal GR development and PGC migration is
observed but discrete gonads fail to form and genetically
male mice show complete male-to-female sex reversal
of their secondary sex characteristics (Birk et al. 2000).
The observed underdevelopment of the GR results from
disrupted proliferation of the gonad primordium (Birk
et al. 2000), as opposed to increased apoptosis observed
in the Wt1−/− and Nr5a1−/− mice (Kreidberg et al. 1993,
Luo et al. 1994). In addition, male- and female-knockout
offspring are infertile, with atrophic uteri, vaginas and
oviducts, no male accessory sex organs, increased folliclestimulating hormone levels, and undetectable levels of
testosterone and oestrogen (Birk et al. 2000). Interestingly,
Lhx9−/− mice show no other phenotypic abnormalities
outside of gonad agenesis and male-to-female sex reversal
(Birk et al. 2000, Tzchori et al. 2009), despite expression
in other tissues, such as the limbs, nervous system and
pancreas, during development. This may be a result of
the functional redundancy of Lhx9 with its closely related
paralogue, LIM homeobox gene, Lhx2 (Jurata & Gill 1998,
Birk et al. 2000, Tzchori et al. 2009).
Empty spiracles homeobox 2 (Emx2)
Emx2 encodes a transcription factor that is the mouse
homolog of the Drosophila head gap gene empty spiracles
(ems). The Emx2 transcript is expressed in the dorsal
telencephalon, mesonephros and coelomic epithelium
(Miyamoto et al. 1997, Yoshida et al. 1997). Emx2−/−-knockout
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mice embryos exhibit normal PGC migration into the UGR
region, but the initial thickening of the coelomic epithelium
is not prominent and the GR soon degenerates (Miyamoto
et al. 1997). These mutants completely lack gonads, genital
tracts and kidneys (Miyamoto et al. 1997). The gonadal
dysgenesis phenotype in Emx2−/− mice is a result of impaired
cell migration from the coelomic epithelium through
the basement membrane, as well as increased apoptosis
(Kusaka et al. 2010). Interestingly, Nr5a1 gene expression
is also significantly affected in Emx2−/− embryos (Kusaka
et al. 2010), suggesting that Emx2 acts upstream of Nr5a1 in
the developmental cascade, but how Emx2 regulates Nr5a1
transcription, whether directly or indirectly remains unclear.
GATA-binding protein 4 (Gata4)
GATA4 is a transcription factor that is essential for the
development of multiple organs such as the heart, foregut,
liver, ventral pancreas and the UGR (Kuo et al. 1997,
Molkentin et al. 1997, Viger et al. 1998, Hu et al. 2013).
Gata4 gene expression in the GR was originally linked to a
role in testis differentiation through activating transcription
of Sry together with WT1 (Tevosian et al. 2002). Later
studies revealed that Gata4 is expressed prior to any other
gonadal factor, initially in the anterior half of the coelomic
epithelium at E9.5 and expanding to the posterior region
by E10.2 (Hu et al. 2013). Gata4-knockout mice show no
signs of gonadal initiation, with the coelomic epithelium
remaining as an undifferentiated monolayer, indicating
that Gata4 is required for the initial thickening of the
coelomic epithelial layer (Hu et al. 2013). In these knockout
mice, Lhx9 and Nr5a1 gene expression is lost, but Wt1 and
Emx2 gene expression is unaffected (Hu et al. 2013). This
suggests that GATA4 acts not only upstream of the Lhx9
gene, but also Nr5a1, possibly even directly regulating both
genes, as binding sites for GATA4 have been identified in the
proximal promoter regions of these two genes (Tremblay &
Viger 2001, Smagulova et al. 2008, Hu et al. 2013).
Genes with minor but essential roles in
Genital ridge development
Other genes have been implicated in early GR development,
although mice-knockout strains for these genes exhibit a
less severe phenotype than that of the null phenotype of
the key genes described earlier. While the loss of function
of the following genes does not cause termination of
gonad development, it does result in the underdevelopment of the gonads, often in combination with sex
reversal of the secondary sex characteristics.
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Transcription factor 21 (Tcf21 or Pod1)
TCF21, also known as epicardin, capsuling or transcription
factor 21, belongs to the basic helix-loop-helix family
of transcription factors. It is expressed by mesodermal
cell types including heart proepicardial cells, kidney
and visceral smooth muscle as well as the endodermal
gastrointestinal tract (Quaggin et al. 1998, 1999, Lu et al.
2000, Miyagishi et al. 2000). Tcf21-knockout mice die
in the perinatal period due to lung, kidney and cardiac
defects, but also display gastric and splenic defects (Cui
et al. 2003, Funato et al. 2003, Plotkin & Mudunuri 2008).
In addition, Tcf21 XX and XY KO mice have irregular
shaped gonads, the urogenital tracts of both XX and XY
mice are indistinguishable and XY pups had feminized
genitalia (Cui et al. 2004). Consistent with this phenotype,
Tcf21 gene expression is initially detected throughout the
GR at the bi-potential stage and continues to be expressed
in the gonads of both sexes, with expression slightly
higher in the testes following sex determination (Tamura
et al. 2001). While the gonad does form in the Tcf21−/−
embryo, morphological defects such as a shorted length
were observed by E11, and vascular abnormalities were
observed by E12.5 (Cui et al. 2004), suggesting a defect
early in gonadal development. Further studies focused on
expression analyses, these suggested a negative regulatory
relationship exists between Tcf21 and Nr5a1, as Tcf21 KO
results in increased Nr5a1 expression and an expanded
Leydig cell population (Miyagishi et al. 2000). Despite
an increase in Leydig cell numbers, the XY KO genitalia
was feminized and the gonads fail to descend from an
abdominal position, suggesting that testosterone levels
were low, either due to later apoptosis of the gonadal
tissue or a not all steroidogenic enzymes were expressed
correctly (Cui et al. 2004). TCF21 also appears to repress
Nr5a1 gene expression in the adrenal gland, with in vitro
studies revealing that TCF21 directly represses Nr5a1 gene
expression, through binding at E-box sequences located
in the Nr5a1 promoter (Franca et al. 2013, 2015).
Interestingly, the Sertoli cells do differentiate in the
Tcf21 KO line, but there was some evidence that this
cell population was reduced in number (although it
was not quantified) (Cui et al. 2004). TCF21 can cause
a sex reversal-like phenotype in vitro using a rat primary
ovarian cell culture system. Overexpression of Tcf21
causes these cells to express Sertoli-like gene markers, in
a similar pattern to that observed with Sry overexpression
(Bhandari et al. 2011). Additionally, the Tcf21 gene has
proposed to be a direct target of SRY (Bhandari et al.
2011). Together, these results suggest that TCF1 acts
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downstream of Sry to promote Sertoli cell expansion and
repress steroidogenic cell lineages.
Sine oculis-related homeobox 1/4 (Six1/Six4)
Six1 and Six4 genes belong to the mammalian homolog of
the Drosophila sine oculis homeobox family of transcription
factors, containing a distinctive SIX domain (required
for protein-protein interactions) and homeodomain
(Kawakami et al. 2000). Six1 and Six4 genes are located
in the same genomic regions within about 100 kb of one
another, and have highly overlapping tissue expression
during mouse development (Boucher et al. 1996, Esteve
& Bovolenta 1999, Ozaki et al. 2001, Fougerousse et al.
2002, Laclef et al. 2003). Six1/4 double KO mice show
different phenotypes compared to either Six1 or Six4
single KO mice, highlighting regions of redundant
function in the development of limbs, skeletal muscle,
sensory neurons and kidney (Grifone et al. 2005, Konishi
et al. 2006, Giordani et al. 2007, Kobayashi et al. 2007).
The suggested functional redundancy between the two
genes is further exhibited as both genes share a common
DNA-binding site, MEF3 (Kawakami et al. 2000, Kumar
2009). In particular, only Six1/4 double KO mice embryos
display smaller gonads and adrenal glands (Kobayashi
et al. 2007, Fujimoto et al. 2013). Out of the essential
GR genes listed previously, only Nr5a1 gene expression
is significantly reduced, a finding corroborated through
reporter assays showing that SIX1/4 is able to transactivate
Nr5a1 transcription (Fujimoto et al. 2013). Furthermore, it
was also shown that SIX1/4 is able to activate Fog2 gene
expression and that interaction, together with GATA4,
regulates Sry gene expression (Fujimoto et al. 2013).
Overall, this indicates that SIX1/4 is required necessary
for sufficient Nr5a1 gene expression in the early gonad
and, a loss of Six1/4 gene expression, reduces Nr5a1 gene
expression, and this may be responsible for the Six1/4
KO undersized gonad phenotype. Nonetheless, there is
still sufficient Nr5a1 gene expression to form the gonad
primordium in Six1/4 KO embryos.
Chromobox homolog 2 (Cbx2) (mouse polycomb group
member, M33)
CBX2 is a component of the polycomb group complex of
regulatory proteins involved in the repression/silencing of
genes. In mice, Cbx2−/−-knockout mice show XY gonadal
male-to-female (testis-to-ovary) sex reversal, and XX
animals have smaller or absent ovaries (Katoh-Fukui et al.
2005). Additionally, mutants show defects in adrenal and
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splenic development, which was shown to be a result of
a reduction in the expression of Nr5a1 (Katoh-Fukui et al.
2005). This has led to the suggestion that CBX2 acts as
an upstream regulator of Nr5a1 gene expression. Cbx2
has also been identified as a factor contributing to the
differentiation of the testis through indirect regulation of
Sry (Katoh-Fukui et al. 2012). Genome-wide identification
of CBX2 target genes in a human Sertoli-like cell line
suggests that CBX2 acts to stimulate male-specific genes,
while suppressing female-pathway genes (Eid et al. 2015).
In humans, a reported case study of a 46, XY child with
female internal and external genitalia and histologically
normal ovaries found a compound loss-of-function
mutation in the coding region of CBX2 (Biason-Lauber
et al. 2009). This study further lends support to the role of
CBX2 in the trans-activation of Nr5a1 and its role in both
the GR and testis developmental pathways (Fig. 4A).
Insulin receptor, Insr and insulin-like growth factor
type 1 receptor (Igf1r)
Insulin and its related growth factors IGF1 and IGF2 regulate
a variety of physiological processes including metabolism,
stimulation of cell proliferation, differentiation and
survival (Efstratiadis 1998). Their function is mediated
by two membrane-associated tyrosine kinase receptors,
the insulin receptor (INSR) and the IGF type 1 receptor
(IGF1R). The genes for Insr, Igf1r and insulin receptorrelated receptor (Irr) have previously been shown to be
necessary for the testis determination pathway, as mutant
mice lacking all three genes show male-to-female sex
reversal and decreased Sry and Sox9 gene expression (Nef
et al. 2003). Recently, it has been shown that Insr and Igf1r,
but not Irr have roles in GR development, whereby mice
lacking both Insr and Igf1r have reduced proliferation
of the GR prior to sex determination but also extensive
downregulation of hundreds of genes associated with
adrenal, testicular and ovarian development (Pitetti et al.
2013). As a result, these mice embryos exhibit agenesis of
the adrenal cortex, along with male-female sex reversal
due to a delay in Sry gene upregulation. Interestingly,
ovarian differentiation is also delayed in these mice,
leaving the GR in an undifferentiated state until about
E16.5 when the ovarian programme is eventually initiated
(Pitetti et al. 2013). Among the genes downregulated are
Wt1, Lhx9 and Nr5a1, indicating that genes essential for
GR development are under the influence of insulin/IGF
signalling (Pitetti et al. 2013), but only partially dependent
on this signalling pathway, as GR development is only
hindered by decreased progenitor cell numbers.
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Pre-B-cell leukaemia homeobox 1 (Pbx1)
Pbx1 encodes a TALE (three amino acid loop extension)
class homeodomain transcription factor that has been
shown to be involved in a number of process during
mammalian embryogenesis including, skeletal development and patterning (Selleri et al. 2001), maintenance
of haematopoiesis (DiMartino et al. 2001), pancreatic
development (Kim et al. 2002) and kidney and adrenal
development (Schnabel et al. 2003). The GR of Pbx1-null
mice are also smaller due to decreased proliferation of
the progenitor cells in the gonad primordium (Schnabel
et al. 2003). Further experiments found that this is due
to the downregulation of Nr5a1 gene expression; PBX1
also upregulates Nr5a1 during adrenal development
(Schnabel et al. 2003). The adrenal gland primordium is
initially part of the GR but then later buds off from the
very rostral end around E10.5 (Schnabel et al. 2003, Pitetti
et al. 2013). Therefore, perturbed Pbx1 gene expression
prior to budding likely affects Nr5a1 expression in
the rostral GR, if not the whole GR, causing reduced
Nr5a1 expression and decreased proliferation of somatic
progenitor cells.
Odd-skipped related 1 (Odd1)
Odd1 gene encodes a zinc finger transcription factor
homologous to the Drosophila odd-skipped class of
transcription factors that are involved in embryonic
patterning and tissue morphogenesis (Wang et al. 2005).
Targeted gene knockout of Odd1 revealed that this gene
functions in both heart and intermediate mesoderm
development (Wang et al. 2005). Odd1−/− embryos
have severe heart malformations, and completely
lack adrenal glands, kidneys and gonads, all of which
derive from intermediate mesoderm (Wang et al. 2005).
Although gonad development was not the focus of
this study, they did show that in early development
the GR was hypoplastic (Wang et al. 2005), likely due
to increased apoptosis observed with the developing
kidney. These hypoplastic GRs appeared to degenerate,
as no visible gonad structures were observed by E15.5
(Wang et al. 2005). Although no further investigation
of Odd1 with regards to urogenital development
has been done since Wang et al. (2005), it is unclear
if the GR phenotype was an effect of Odd1 acting
either directly in the GR or indirectly, potentially
acting via downregulation of Wt1 gene expression,
which also has an apoptotic phenotype when deleted
(Hammes et al. 2001).
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Genital ridge formation in humans
Much of what is known of human gonadal development
is based on early embryology work and case studies of
individuals with abnormal characteristics stemming from
improper sexual development as a result of disruption of
genes involved in this process. Recently, as sequencing
technologies have become more affordable and require
less material, more studies are using human-derived
samples to study human sex development at the molecular
level, mostly through studies of cases of disorders of
sexual development (DSD) (O’Shaughnessy et al. 2007,
Ostrer et al. 2007, Houmard et al. 2009, Del Valle et al.
2017, Li et al. 2017). These are congenital disorders that
arise as a consequence of atypical chromosomal, gonadal
or anatomical sexual development (Hughes et al. 2006),
including some of the aforementioned genes involved
in GR development. The term DSD replaced old and
ambiguous terms such as intersex, hermaphroditism and
pseudo-hermaphroditism previously used to describe
such disorders in humans (Dreger et al. 2005, Lees &
Tuch 2006). DSD phenotypes include a broad range of
conditions such as failure of gonad formation, mixed
gonadal tissue (male- and female-specific cell types within
the tissue), ambiguous genitalia and failure of secondary
sexual characteristics to develop normally (Cools et al.
2006). There is limited data on the incidence of DSDs,
but it is estimated that the overall worldwide incidence
of DSDs is 1 in 5,500 (Damiani 2007, Houk & Lee 2008).
In humans, the gonad develops from the coelomic
epithelium (Fig. 5), and the first signs of sex differentiation
are observed between 6 and 7 weeks with the formation of
testicular cords (Gruenwald 1942, Wyndham 1943). Germ
cells are first detected in the hindgut dorsal mesentery at
4 weeks (Carnegie Stage 12 (CS12)) and migrate into the
GR by 5 weeks (CS16) (Mckay et al. 1953). Gondal sex
determination occurs around 41–42 days in human embryos,
signified by the upregulation of SRY gene expression in XY
embryos ((Hanley et al. 2000, Del Valle et al. 2017, Mamsen
et al. 2017). Genes required for steroidogenesis and secreted
factors such as AMH are essential for the sex-specific
development of genitalia and the reproductive tract, with
their expression commencing between 54 and 57 dpc
(CS23). Genes essential for GR development in mice are
also expressed at similar levels in both XX and XY gonads
(LHX9, EMX2, WT1 and GATA4), further supporting a role
for these factors in early human gonad development (Del
Valle et al. 2017, Mamsen et al. 2017).
Despite their apparent early essential roles in gonad
development, the loss of function of genes required for sex
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Figure 5
Histology sections through human embryos 36–44 days (Carnegie stages
14–18). At ~36 days the coelomic epithelium begins to thicken, and by
39 days a ridge of tissue is forming, facing into the gut cavity. Just prior to
sex determination (~42 days), the mesenchyme has proliferated to form a
gonad region that is now easily distinguished from the neighbouring
mesonephros. Section images were obtained from the Virtual Human
Embryo resource (https://www.prenatalorigins.org/virtual-humanembryo/). CE, coelomic epithelium; DM, dorsal mesentery; M,
mesonephros; MT, mesonephric tubule; MV, mesonephric vesicle; PMD,
paramesonephric duct. Scale bar = 100 µm.
development typically results in a range of phenotypes from
complete gonad dysgenesis to adult infertility. Mutations
in some of these early gonad development genes are also
responsible for some cases of human idiopathic infertility
in cases with apparently normal gonad development.
Like DSDs, infertility is a condition associated with severe
emotional and mental stress, particularly in societies where
there is a social emphasis placed upon the ideal of having
biological children (Ashraf et al. 2014). The mechanisms
of infertility in males and females are varied in both
origin and functional impact and often these conditions
are thought to have an underlying genetic component
(Zorrilla & Yatsenko 2013). Only 6–18% of infertility cases
have identifiable genetic causes (mainly sex-chromosome
abnormalities) indicating that for many cases of infertility
(and subfertility), like DSD, the underlying genetic factors
are yet to be elucidated.
Genes with mutations commonly identified in DSD
studies include androgen receptor and synthesis genes
(androgen receptor (AR), CYP17A1, SRD5A2), NR5A1(SF1),
WT1, GATA4, SRY, DAX1 and CHD7 (Kremen et al. 2017).
Those patients with DSD and a complete gonad dysgenesis
phenotype carry mutations in SRY, MAP3K1, DHH and
NR5A1 genes (Ono & Harley 2013). While these genes
are also critical for mouse gonadal development, largely
supporting the use of the mouse as a model for human
gonad development, there are several exceptions. For
example, sequencing screens have found gain-of-function
mutations in the mitogen-activated protein kinase kinase
kinase 1 (MAP3K1) gene, including patients with streak
gonads and female genitalia (Pearlman et al. 2010, Loke
et al. 2014, Baxter et al. 2015, Eggers et al. 2016, Granados
et al. 2017), suggesting a requirement for MAP3K1
function in gonad development for both sexes. However,
although the mouse orthologue, Map3k1, is expressed in
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the E11.5 gonad mouse, knockout mice have only minor
testicular abnormalities, indicating a minimal role in XY
gonadal development (Warr et al. 2011). This stresses the
importance of additionally developing mouse models that
replicate human gene mutations to study phenotype, as
often human gene mutations do not result in a complete
loss of gene/protein function but rather gain of function.
Mutations in NR5A1 were identified in 4% of patients
examined with unexplained male infertility (Bashamboo
et al. 2010a, Ropke et al. 2013) and in female patients
within premature ovarian failure (Lourenco et al. 2009).
Novel NR5A1 mutation I (R92W) leads to 46, XX ovotestis
(SRY negative) (Igarashi et al. 2017, Baetens et al. 2017b).
The types of NR5A1 gene mutations and phenotypes
associated with these disorders are reviewed in (Ferraz-deSouza et al. 2011). WT1 mutations have also been found
in male and female cases of infertility, with ‘normal’
gonadal development (Seabra et al. 2015, Nathan et al.
2017). Humans are not the only species to present with
variable phenotypes; in mice, the genetic background
or strain strongly influences the adult phenotype of
many genes linked to gonadal development. In one such
example, gene knockout of Gadd45g (growth arrest and
DNA damage-inducible protein 45 g) on a mixed genetic
background (129/C57BL/6), 20% of the XY homozygous
mice developed as infertile males, whereas on a C57BL/6
(B6) background, 100% of XY mice were sex reversed
(Johnen et al. 2013). Genetic background also influences
the phenotype of Nr5a1-, Fgf9- and Wt1-null mice (Meeks
et al. 2003, Brennan & Capel 2004). The B6 mouse strain
is more likely to result in a male-to-female sex reversal
phenotype than the 129S1/SvImJ (129S1) strain, and
differences in gonadal gene expression between these
strains are observed even prior to sex determination at
E11.5 (Colvin et al. 2001, Munger et al. 2009). Therefore,
even though studies have identified genes critical to the
early steps of gonad development, a loss-of-function
mutation does not necessarily lead to complete gonadal
dysgenesis. In at least some cases, genetic background and
possibly environmental factors determine the phenotypic
consequences of loss-of-function mutations in these genes.
Future directions: unravelling the molecular
pathways of early gonad development
The advent and affordability of high-throughput sequencing technologies and new methods of replicating organ
development in vitro, together will be valuable research
tools in propelling forward both genetic and cellular
biology into early GR development.
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The use of single-cell RNA-seq (scRNA-seq) has rapidly
furthered our understanding of developmental events,
particularly within heterogeneous cell populations
(Shapiro et al. 2013). Given that the GR consists of a broad
variety of cellular precursors for endothelial, steroidogenic
and supporting cell lineages, along with maturing germ
cells, it is especially suitable for scRNA-seq analysis. Li
et al. undertook scRNA-seq analysis of isolated single
foetal germ cells and their surrounding ‘niche’ somatic
cells from 4- to 26-week-old human embryos (Li et al.
2017). Based on gene expression profiles from this study,
somatic cells in the early gonad can be divided into four
groups within each sex. XX gonadal cells are comprised of
endothelial cells, and three types of maturing granulosa
cells (early-(10 weeks), mid-(10–20 weeks) and lategranulosa (20–26 weeks)) (Li et al. 2017). In XY gonads,
somatic cells group into Sertoli cells, Leydig cell precursors,
differentiated Leydig cells and endothelial cells (Li et al.
2017). Systematic examination of the expression profiles
of each gonadal cell population during development will
not only improve our knowledge of the in vivo mechanisms
of cell differentiation but also the conditions required to
induce correct cell differentiation in vitro.
Organoid systems are becoming popular in vitro models
of organ development (Fatehullah et al. 2016). Isolated
preparations of human somatic and germ cells can selforganize into a testicular-like organoid using an artificial
scaffold to aid 3D organization (Baert et al. 2017). These
studies make use of cells that have already undergone
sex-specific differentiation, as the cells are isolated from
post-natal tissues (Baert et al. 2017). Recently, Sepponen
et al., reported using human embryonic stem cells (hESCs)
culture conditions to sequentially induce the primitive
streak, followed by intermediate mesoderm and finally
bi-potential-like gonadal cells expressing genes such as
LHX9, EMX2, WT1 and GATA4 (Sepponen et al. 2017).
This study found that timing and levels of BMPs (bone
morphogenetic protein), WNT/β-catenin and Activin-A
signalling ligands are essential to promote differentiation
of gonadal cell precursors, over other mesodermal cell
types (Sepponen et al. 2017). These studies, along with
new sequencing resources, lay the groundwork for future
research for not only modelling the early events of human
gonad development, but to also examine the functional
consequences of gene mutations identified in DSD
patients using cultured cells engineered with the same
genetic mutation.
Several groups have taken a comprehensive targeted
screening approach in order to identify genetic factors in
DSD patients, and this in turn may lead to the identification
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of novel genes required for GR development. Exome
sequencing and targeted gene sequencing identified the
genetic cause (classed as a functional gene mutation) in
28–38% of cases examined (Baxter et al. 2015, Dong et al.
2016, Fan et al. 2017, Kim et al. 2017). Deep sequencing of
64 known and 967 candidate genes improved the genetic
diagnosis rate to 43% for one patient cohort (Eggers et al.
2016). Thus, despite advances in sequencing technologies,
over 50% of DSD cases remain without a genetic diagnosis.
While targeted sequencing and exome sequencing
studies have focused on the protein coding regions of the
genome, epigenetic processes, gene regulatory elements
and non-coding RNAs (ncRNAs) are just as important
for correct embryonic development. Errors in any of
these gene regulatory mechanisms may underlie many
cases of idiopathic DSD that lack mutations in proteincoding genes. Studies in vertebrates have largely focused
on identifying sex-dimorphic expression of small ncRNAs
called miRNAs following sex determination (Bannister et al.
2009, Real et al. 2013, Wainwright et al. 2013, Presslauer
et al. 2017). There is limited information regarding how
these miRNAs function in sex determination, if their
function is essential, if they act to finely adjust gene
expression levels during gonad development and whether
these, and others, have earlier roles in the formation of
the bi-potential gonad. Currently no miRNAs have been
linked to human gonad development. Long ncRNAs are
another important class of ncRNAs, which function to
regulate gene expression (reviewed in Moran et al. 2012).
With respect to sex development, these have been most
thoroughly investigated for their role in X-chromosome
dosage compensation (Cerase et al. 2015). It remains to
be determined if autosomally encoded long ncRNAs
contribute to mammalian sex determination and gonadal
development but given their important roles in the
development of other organ systems, it is likely they have
a role in some aspects of gonadal development.
Genome regulatory elements have been difficult to
identify as most lie within the non-coding regions of the
genome and can act over long distances to influence gene
expression via chromatin folding. Mutations in regulatory
elements range from single nucleotide sequence variants
that prevent or reduce binding of a transcription factor
to their DNA target sequence, to larger deletions,
duplications and translocations resulting in structural
changes that alter chromatin confirmation and regulatory
interactions between enhancers and their target genes.
Loss-of-function mutations in regulatory elements
located near the SOX9 gene, a gene important for male
sex determination, are the best-characterized regulatory
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changes associated with DSD (reviewed in (Baetens et al.
2017a). As putative regulatory elements are difficult to
predict, few have been mapped for human genes associated
with early gonadal development. Recent genome-wide
studies, including those mapping the chromatin state in
specific cell lineages (Mikkelsen et al. 2007), will improve
our ability to predict if DNA changes associated with DSD
lie within gene regulatory regions.
Epigenetic mechanisms such as DNA methylation
and histone modifications have been implicated in the
regulation of Sry gene in mice and dogs (Nishino et al.
2011, Jeong et al. 2016, Kuroki et al. 2017). Loss of function
of the JMJD1A gene, which encodes a H3K9 demethylase
enzyme, results in XY sex reversal (Kuroki et al. 2017).
Some cases of XY DSD with complete sex reversal in dogs
are thought to be due to persistent DNA hypermethylation
of the Sry gene (Jeong et al. 2016). Therefore, it is likely
that some cases of human DSD may be the result of
mutations to epigenetic regulatory factors. Regulation of
gene expression through epigenetic mechanisms is also
especially sensitive to environmental influences and this
impacts on many developmental programmes including
sex determination (Feil & Fraga 2012). DNA methylation
levels, determined by environmental factors, are vital
to many naturally occurring forms of sex reversal and
environmental sex determination in animals (Capel
2017). While difficult to study with respect to human DSD,
it is possible that DNA methylation may play a role in
balancing one sex developmental trajectory over another,
and thus, errors in this may lead to gonad dysgenesis or
sex reversal in humans.
Summary
The complexity of reproductive development is reflected
in the difficulty in assigning a genetic diagnosis in
most cases of human DSD. While we know the genetic
aetiology of a small number of DSDs, up to as many as
75% of individuals with a DSD will remain without
a genetic diagnosis (Arboleda et al. 2014). Even with
whole genome sequencing, it is often difficult to identify
functional variants and causal mutations, rendering
many sequencing approaches somewhat ineffective
(Fan et al. 2017). Gene expression levels, epigenetic
modifiers and genetic background, along with the type
of mutation and its functional consequence can all
influence the resulting phenotype for both humans and
mice. The future development of new technologies and
improvement of existing ones will provide us with a much
better understanding of the processes underlying normal
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Journal of Molecular
Endocrinology
Y Yang et al.
gonadal development in both human and mouse models,
which in turn will lead to improved diagnosis in cases of
DSD and infertility.
Declaration of interest
The authors declare that there is no conflict of interest that could be
perceived as prejudicing the impartiality of this review.
Funding
This work did not receive any specific grant from any funding agency in the
public, commercial, or not-for-profit sector.
Acknowledgements
The authors would like to thank James Smith, Kathy Sircombe, Rebecca
Clarke and Susie Szakats for their feedback on earlier versions of this
manuscript. Yisheng Yang was supported by a University of Otago PhD
scholarship award. Our work was funded by a University of Otago Research
Grant to Megan Wilson.
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Received in final form 18 July 2018
Accepted 24 July 2018
Accepted Preprint published online 24 July 2018
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