PanDDA analysis group deposition
Imprachim, N., Yosaatmadja, Y., von-Delft, F., Bountra, C., Gileadi, O., Newman, J.A.To be published.
Experimental Data Snapshot
Molecule | Chains | Sequence Length | Organism | Details | Image |
---|---|---|---|---|---|
Proofreading exoribonuclease nsp14 | A [auth D] | 523 | Severe acute respiratory syndrome coronavirus 2 | Mutation(s): 0  Gene Names: rep, 1a-1b EC: 3.1.13 | |
Find proteins for P0DTD1 (Severe acute respiratory syndrome coronavirus 2) Explore P0DTD1  Go to UniProtKB:  P0DTD1 | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P0DTD1 | ||||
|
Ligands 3 Unique | |||||
---|---|---|---|---|---|
ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
JGA (Subject of Investigation/LOI) Query on JGA | G [auth D], H [auth D] | N-ethyl-N'-(5-methyl-1,2-oxazol-3-yl)urea C7 H11 N3 O2 OLTOJZGRSVNYRB-UHFFFAOYSA-N | |||
PO4 Query on PO4 | E [auth D], F [auth D] | PHOSPHATE ION O4 P NBIIXXVUZAFLBC-UHFFFAOYSA-K | |||
ZN Query on ZN | B [auth D], C [auth D], D | ZINC ION Zn PTFCDOFLOPIGGS-UHFFFAOYSA-N |
Length ( Å ) | Angle ( ˚ ) |
---|---|
a = 67.651 | α = 90 |
b = 68.431 | β = 90 |
c = 138.191 | γ = 90 |
Software Name | Purpose |
---|---|
BUSTER | refinement |
Aimless | data scaling |
PDB_EXTRACT | data extraction |
XDS | data reduction |
REFMAC | phasing |
Funding Organization | Location | Grant Number |
---|---|---|
Not funded | United Kingdom | None |