CRYSTAL STRUCTURE OF THE CONSERVED CORE DOMAIN OF VENEZUALAN EQUINE ENCEPHALITIS CAPSID PROTEIN
Watowich, S.J., Xu, Y., Lemon, A.P., Weaver, S.To be published.
1EP5
CRYSTAL STRUCTURE OF THE CONSERVED CORE DOMAIN OF VENEZUALAN EQUINE ENCEPHALITIS CAPSID PROTEIN
- PDB DOI: https://doi.org/10.2210/pdb1EP5/pdb
- Classification: HYDROLASE
- Organism(s): Venezuelan equine encephalitis virus
- Expression System: Escherichia coli
- Mutation(s): No
- Deposited: 2000-03-27 Released: 2003-07-08
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 2.30 Å
- R-Value Free: 0.263
- R-Value Work: 0.228
wwPDB Validation 3D Report Full Report
This is version 1.4 of the entry. See complete history.
Literature
To be published.
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
| Molecule | Chains | Sequence Length | Organism | Details | Image |
|---|---|---|---|---|---|
| CAPSID PROTEIN C | A [auth B], B [auth A], C | 157 | Venezuelan equine encephalitis virus | Mutation(s): 0 EC: 3.4.21 | |
Find proteins for P05674 (Venezuelan equine encephalitis virus (strain TC-83)) Explore P05674 Go to UniProtKB: P05674 | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | P05674 | ||||
| |||||
Small Molecules
| Ligands 2 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| SO4 Query on SO4 | I [auth A], J [auth A] | SULFATE ION O4 S QAOWNCQODCNURD-UHFFFAOYSA-L | |||
| URE Query on URE | D [auth B] E [auth B] F [auth B] G [auth B] H [auth B] | UREA C H4 N2 O XSQUKJJJFZCRTK-UHFFFAOYSA-N | |||
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 2.30 Å
- R-Value Free: 0.263
- R-Value Work: 0.228
- Space Group: P 21 21 21
Unit Cell:
| Length ( Å ) | Angle ( ˚ ) |
|---|---|
| a = 69.33 | α = 90 |
| b = 75.18 | β = 90 |
| c = 94.66 | γ = 90 |
| Software Name | Purpose |
|---|---|
| DENZO | data reduction |
| SCALEPACK | data scaling |
| AMoRE | phasing |
| CNS | refinement |
Entry History
Deposition Data
- Released Date: 2003-07-08 Deposition Author(s): Watowich, S.J.
Revision History (Full details and data files)
- Version 1.0: 2003-07-08
Type: Initial release - Version 1.1: 2008-04-27
Changes: Version format compliance - Version 1.2: 2011-07-13
Changes: Version format compliance - Version 1.3: 2018-01-31
Changes: Experimental preparation - Version 1.4: 2024-02-07
Changes: Data collection, Database references, Derived calculations