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TNF tumor necrosis factor [ Pteronotus mesoamericanus ]

Gene ID: 129066972, updated on 5-Apr-2024

Summary

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Gene symbol
TNF
Gene description
tumor necrosis factor
Gene type
protein coding
RefSeq status
MODEL
Organism
Pteronotus mesoamericanus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Mormoopidae; Pteronotus
Orthologs
human mouse all
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Genomic context

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See TNF in Genome Data Viewer
Location:
chromosome: Un
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2024_03 current CSHL_Meso_final (GCF_021234165.1) Unplaced Scaffold NW_026555085.1 (2005137..2006881)

NW_026555085.1Genomic Context describing neighboring genes Neighboring gene DExD-box helicase 39B Neighboring gene small nucleolar RNA SNORD83 Neighboring gene ATPase H+ transporting V1 subunit G2 Neighboring gene NFKB inhibitor like 1 Neighboring gene lymphotoxin alpha Neighboring gene lymphotoxin beta Neighboring gene leukocyte specific transcript 1 Neighboring gene natural cytotoxicity triggering receptor 3

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_026555085 Unplaced Scaffold Reference CSHL_Meso_final

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cytokine activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables tumor necrosis factor receptor binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in extrinsic apoptotic signaling pathway via death domain receptors IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in immune response IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of NF-kappaB transcription factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in tumor necrosis factor-mediated signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cell surface IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in extracellular space IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
tumor necrosis factor

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_021234165.1-RS_2024_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CSHL_Meso_final

Genomic

  1. NW_026555085.1 Reference CSHL_Meso_final

    Range
    2005137..2006881
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_054568679.1 → XP_054424654.1  tumor necrosis factor

Nucleotide Protein
Heading Accession and Version

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