Vertebrate microRNA genes
LP Lim, ME Glasner, S Yekta, CB Burge, DP Bartel - Science, 2003 - science.org
MicroRNAs (miRNAs) are an abundant class of 22-nucleotide (nt) noncoding RNAs, some
of which are known to control the expression of other genes at the posttranscriptional level (1–…
of which are known to control the expression of other genes at the posttranscriptional level (1–…
A uniform system for the annotation of vertebrate microRNA genes and the evolution of the human microRNAome
Although microRNAs (miRNAs) are among the most intensively studied molecules of the past
20 years, determining what is and what is not a miRNA has not been straightforward. Here, …
20 years, determining what is and what is not a miRNA has not been straightforward. Here, …
[PDF][PDF] Vertebrate microRNA genes and CpG-islands
KL Ng, CH Huang, MC Tsai - WSEAS Transactions on Biology …, 2010 - researchgate.net
A portion of five vertebrate species microRNA (miRNA) genes are found to associate with
CpG-islands. It is calculated that 74 of 462 (16.0%), 37 of 373 (9.9%), 25 of 234 (10.7%), 25 of …
CpG-islands. It is calculated that 74 of 462 (16.0%), 37 of 373 (9.9%), 25 of 234 (10.7%), 25 of …
Computational prediction of amphioxus microRNA genes and their targets
Y Luo, S Zhang - Gene, 2009 - Elsevier
Using a homology search based on genomic survey sequence analysis and microRNA (miRNA)
secondary structure, a total of 51 miRNA genes encoding 30 amphioxus miRNAs were …
secondary structure, a total of 51 miRNA genes encoding 30 amphioxus miRNAs were …
The evolution of animal microRNA function
MicroRNAs (miRNAs) are a large class of small RNAs that function as negative gene
regulators in eukaryotes. They regulate diverse biological processes, and bioinformatics data …
regulators in eukaryotes. They regulate diverse biological processes, and bioinformatics data …
The expansion of the metazoan microRNA repertoire
Background MicroRNAs have been identified as crucial regulators in both animals and
plants. Here we report on a comprehensive comparative study of all known miRNA families in …
plants. Here we report on a comprehensive comparative study of all known miRNA families in …
Coding genes helped the origination and diversification of intragenic miRNAs
C Liu, X Zhang, J Yuan, J Xiang… - Molecular Biology and …, 2025 - academic.oup.com
Noncoding miRNAs tend to evolve within introns of coding genes who provide them with
transcriptional opportunity. As an outcome of natural selection, the intragenic position of …
transcriptional opportunity. As an outcome of natural selection, the intragenic position of …
Abundant and dynamically expressed miRNAs, piRNAs, and other small RNAs in the vertebrate Xenopus tropicalis
J Armisen, MJ Gilchrist, A Wilczynska… - Genome …, 2009 - genome.cshlp.org
Small regulatory RNAs have recently emerged as key regulators of eukaryotic gene expression.
Here we used high-throughput sequencing to determine small RNA populations in the …
Here we used high-throughput sequencing to determine small RNA populations in the …
Evolution of the miR199-214 cluster and vertebrate skeletal development
T Desvignes, A Contreras, JH Postlethwait - RNA biology, 2014 - Taylor & Francis
MicroRNA (miRs) are short non-coding RNAs that fine-tune the regulation of gene expression
to coordinate a wide range of biological processes. MicroRNAs are transcribed from miR …
to coordinate a wide range of biological processes. MicroRNAs are transcribed from miR …
Sex-biased microRNA expression in mammals and birds reveals underlying regulatory mechanisms and a role in dosage compensation
M Warnefors, K Mössinger, J Halbert, T Studer… - Genome …, 2017 - genome.cshlp.org
Sexual dimorphism depends on sex-biased gene expression, but the contributions of microRNAs
(miRNAs) have not been globally assessed. We therefore produced an extensive small …
(miRNAs) have not been globally assessed. We therefore produced an extensive small …
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