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Series GSE164547 Query DataSets for GSE164547
Status Public on Jan 12, 2021
Title Single-cell RNA sequencing of human nasal swab from COVID-19 patient
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Summary Understanding on pathogenesis of COVID-19 is rapidly growing, but primary target cells of SARS-CoV-2 infection is still not known. Here, we performed single cell RNA sequencing on human nasal swab from COVID-19 patient to investigate the expression patterns of host cell entry factors of SARS-CoV-2.
 
Overall design Single cells from COVID-19 patients' nasal swabs were isolated and single-cell transcriptome libraries were generated
 
Contributor(s) Koh G, Kim J
Citation(s) 34003804
Submission date Jan 11, 2021
Last update date May 23, 2021
Contact name JUNGMO KIM
E-mail(s) wajm97@gmail.com
Organization name Institute for Basic Science
Department Center for Vascular Research
Street address 291 Daehak-ro, Yuseong-gu
City Daejeon
State/province -- None selected --
ZIP/Postal code 34141
Country South Korea
 
Platforms (1)
GPL20795 HiSeq X Ten (Homo sapiens)
Samples (6)
GSM5013766 COVID-19 patient 1
GSM5013767 COVID-19 patient 2
GSM5013768 COVID-19 patient 2, Day3
Relations
BioProject PRJNA691164
SRA SRP301227

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE164547_RAW.tar 140.5 Mb (http)(custom) TAR (of TXT)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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