rs11746690 RefSNP Report - dbSNP

Welcome to the Reference SNP (rs) Report

All alleles are reported in the Forward orientation. Click on the Variant Details tab for details on Genomic Placement, Gene, and Amino Acid changes. HGVS names are in the HGVS tab.

Reference SNP (rs) Report

This page reports data for a single dbSNP Reference SNP variation (RefSNP or rs) from the new redesigned dbSNP build.
Top of the page reports a concise summary for the rs, with more specific details included in the corresponding tabs below.
All alleles are reported in the Forward orientation. Use the Genomic View to inspect the nucleotides flanking the variant, and its neighbors.
For more information see Help documentation.

rs11746690

Current Build 156

Released September 21, 2022

Organism: Homo sapiens
Position: chr5:149764400 (GRCh38.p14) Help
The anchor position for this RefSNP. Includes all nucleotides potentially affected by this change, thus it can differ from HGVS, which is right-shifted. See here for details.
Alleles: G>A
Variation Type: SNV Single Nucleotide Variation
Frequency: A=0.083649 (22141/264690, TOPMED)
A=0.062364 (12652/202874, ALFA)
A=0.081828 (11473/140208, GnomAD) (+ 20 more)
A=0.06119 (1729/28258, 14KJPN)
A=0.06134 (1028/16760, 8.3KJPN)
A=0.0865 (554/6404, 1000G_30x)
A=0.0871 (436/5008, 1000G)
A=0.0464 (208/4480, Estonian)
A=0.0509 (196/3854, ALSPAC)
A=0.0539 (200/3708, TWINSUK)
A=0.0669 (196/2930, KOREAN)
A=0.0734 (153/2084, HGDP_Stanford)
A=0.1106 (209/1890, HapMap)
A=0.0737 (135/1832, Korea1K)
A=0.043 (43/998, GoNL)
A=0.043 (27/626, Chileans)
A=0.033 (20/600, NorthernSweden)
A=0.079 (17/216, Qatari)
A=0.086 (18/210, Vietnamese)
A=0.16 (14/86, Ancient Sardinia)
G=0.47 (30/64, SGDP_PRJ)
A=0.07 (3/40, GENOME_DK)
G=0.2 (1/4, Siberian)

Clinical Significance: Not Reported in ClinVar
Gene : Consequence: PPARGC1B : Intron Variant
Publications: 1 citation
Genomic View: See rs on genome

ALFA Allele Frequency
The ALFA project provide aggregate allele frequency from dbGaP. More information is available on the project page including descriptions, data access, and terms of use.

Release Version: 20231103111315

Population	Group	Sample Size	Ref Allele	Alt Allele	Ref HMOZ	Alt HMOZ	HTRZ	HWEP
Total	Global	202874	G=0.937636	A=0.062364	0.879886	0.004614	0.1155	9
European	Sub	174256	G=0.940352	A=0.059648	0.884549	0.003845	0.111606	2
African	Sub	7770	G=0.8515	A=0.1485	0.725354	0.022394	0.252252	0
African Others	Sub	276	G=0.812	A=0.188	0.666667	0.043478	0.289855	0
African American	Sub	7494	G=0.8529	A=0.1471	0.727515	0.021617	0.250867	0
Asian	Sub	748	G=0.913	A=0.087	0.836898	0.010695	0.152406	0
East Asian	Sub	572	G=0.911	A=0.089	0.835664	0.013986	0.15035	1
Other Asian	Sub	176	G=0.920	A=0.080	0.840909	0.0	0.159091	0
Latin American 1	Sub	910	G=0.925	A=0.075	0.857143	0.006593	0.136264	0
Latin American 2	Sub	7046	G=0.9597	A=0.0403	0.921374	0.001987	0.076639	0
South Asian	Sub	5052	G=0.9644	A=0.0356	0.931908	0.003167	0.064925	5
Other	Sub	7092	G=0.9285	A=0.0715	0.86379	0.006768	0.129442	1

Frequency tab displays a table of the reference and alternate allele frequencies reported by various studies and populations. Table lines, where Population="Global" refer to the entire study population, whereas lines, where Group="Sub", refer to a study-specific population subgroupings (i.e. AFR, CAU, etc.), if available. Frequency for the alternate allele (Alt Allele) is a ratio of samples observed-to-total, where the numerator (observed samples) is the number of chromosomes in the study with the minor allele present (found in "Sample size", where Group="Sub"), and the denominator (total samples) is the total number of all chromosomes in the study for the variant (found in "Sample size", where Group="Study-wide" and Population="Global").

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Study	Population	Group	Sample Size	Ref Allele	Alt Allele
TopMed	Global	Study-wide	264690	G=0.916351	A=0.083649
Allele Frequency Aggregator	Total	Global	202874	G=0.937636	A=0.062364
Allele Frequency Aggregator	European	Sub	174256	G=0.940352	A=0.059648
Allele Frequency Aggregator	African	Sub	7770	G=0.8515	A=0.1485
Allele Frequency Aggregator	Other	Sub	7092	G=0.9285	A=0.0715
Allele Frequency Aggregator	Latin American 2	Sub	7046	G=0.9597	A=0.0403
Allele Frequency Aggregator	South Asian	Sub	5052	G=0.9644	A=0.0356
Allele Frequency Aggregator	Latin American 1	Sub	910	G=0.925	A=0.075
Allele Frequency Aggregator	Asian	Sub	748	G=0.913	A=0.087
gnomAD - Genomes	Global	Study-wide	140208	G=0.918172	A=0.081828
gnomAD - Genomes	European	Sub	75950	G=0.94687	A=0.05313
gnomAD - Genomes	African	Sub	41994	G=0.85469	A=0.14531
gnomAD - Genomes	American	Sub	13660	G=0.95081	A=0.04919
gnomAD - Genomes	Ashkenazi Jewish	Sub	3324	G=0.9308	A=0.0692
gnomAD - Genomes	East Asian	Sub	3130	G=0.9144	A=0.0856
gnomAD - Genomes	Other	Sub	2150	G=0.9228	A=0.0772
14KJPN	JAPANESE	Study-wide	28258	G=0.93881	A=0.06119
8.3KJPN	JAPANESE	Study-wide	16760	G=0.93866	A=0.06134
1000Genomes_30x	Global	Study-wide	6404	G=0.9135	A=0.0865
1000Genomes_30x	African	Sub	1786	G=0.8393	A=0.1607
1000Genomes_30x	Europe	Sub	1266	G=0.9352	A=0.0648
1000Genomes_30x	South Asian	Sub	1202	G=0.9617	A=0.0383
1000Genomes_30x	East Asian	Sub	1170	G=0.9154	A=0.0846
1000Genomes_30x	American	Sub	980	G=0.959	A=0.041
1000Genomes	Global	Study-wide	5008	G=0.9129	A=0.0871
1000Genomes	African	Sub	1322	G=0.8343	A=0.1657
1000Genomes	East Asian	Sub	1008	G=0.9167	A=0.0833
1000Genomes	Europe	Sub	1006	G=0.9364	A=0.0636
1000Genomes	South Asian	Sub	978	G=0.960	A=0.040
1000Genomes	American	Sub	694	G=0.957	A=0.043
Genetic variation in the Estonian population	Estonian	Study-wide	4480	G=0.9536	A=0.0464
The Avon Longitudinal Study of Parents and Children	PARENT AND CHILD COHORT	Study-wide	3854	G=0.9491	A=0.0509
UK 10K study - Twins	TWIN COHORT	Study-wide	3708	G=0.9461	A=0.0539
KOREAN population from KRGDB	KOREAN	Study-wide	2930	G=0.9331	A=0.0669
HGDP-CEPH-db Supplement 1	Global	Study-wide	2084	G=0.9266	A=0.0734
HGDP-CEPH-db Supplement 1	Est_Asia	Sub	470	G=0.923	A=0.077
HGDP-CEPH-db Supplement 1	Central_South_Asia	Sub	414	G=0.966	A=0.034
HGDP-CEPH-db Supplement 1	Middle_Est	Sub	350	G=0.860	A=0.140
HGDP-CEPH-db Supplement 1	Europe	Sub	320	G=0.953	A=0.047
HGDP-CEPH-db Supplement 1	Africa	Sub	242	G=0.855	A=0.145
HGDP-CEPH-db Supplement 1	America	Sub	216	G=0.981	A=0.019
HGDP-CEPH-db Supplement 1	Oceania	Sub	72	G=1.00	A=0.00
HapMap	Global	Study-wide	1890	G=0.8894	A=0.1106
HapMap	American	Sub	770	G=0.916	A=0.084
HapMap	African	Sub	690	G=0.823	A=0.177
HapMap	Asian	Sub	254	G=0.949	A=0.051
HapMap	Europe	Sub	176	G=0.949	A=0.051
Korean Genome Project	KOREAN	Study-wide	1832	G=0.9263	A=0.0737
Genome of the Netherlands Release 5	Genome of the Netherlands	Study-wide	998	G=0.957	A=0.043
Chileans	Chilean	Study-wide	626	G=0.957	A=0.043
Northern Sweden	ACPOP	Study-wide	600	G=0.967	A=0.033
Qatari	Global	Study-wide	216	G=0.921	A=0.079
A Vietnamese Genetic Variation Database	Global	Study-wide	210	G=0.914	A=0.086
Ancient Sardinia genome-wide 1240k capture data generation and analysis	Global	Study-wide	86	G=0.84	A=0.16
SGDP_PRJ	Global	Study-wide	64	G=0.47	A=0.53
The Danish reference pan genome	Danish	Study-wide	40	G=0.93	A=0.07
Siberian	Global	Study-wide	4	G=0.2	A=0.8

Variant Details tab shows known variant placements on genomic sequences: chromosomes (NC_), RefSeqGene, pseudogenes or genomic regions (NG_), and in a separate table: on transcripts (NM_) and protein sequences (NP_). The corresponding transcript and protein locations are listed in adjacent lines, along with molecular consequences from Sequence Ontology. When no protein placement is available, only the transcript is listed. Column "Codon[Amino acid]" shows the actual base change in the format of "Reference > Alternate" allele, including the nucleotide codon change in transcripts, and the amino acid change in proteins, respectively, allowing for known ribosomal slippage sites. To view nucleotides adjacent to the variant use the Genomic View at the bottom of the page - zoom into the sequence until the nucleotides around the variant become visible.

Genomic Placements

Sequence name	Change
GRCh38.p14 chr 5	NC_000005.10:g.149764400G>A
GRCh37.p13 chr 5	NC_000005.9:g.149143963G>A
PPARGC1B RefSeqGene	NG_016747.1:g.39149G>A

Gene: PPARGC1B, PPARG coactivator 1 beta (plus strand)

Molecule type	Change	Amino acid[Codon]	SO Term
PPARGC1B transcript variant 2	NM_001172698.2:c.78+33980… NM_001172698.2:c.78+33980G>A	N/A	Intron Variant
PPARGC1B transcript variant 1	NM_133263.4:c.78+33980G>A	N/A	Intron Variant
PPARGC1B transcript variant 3	NM_001172699.2:c.	N/A	Genic Upstream Transcript Variant
PPARGC1B transcript variant X1	XM_011537553.3:c.78+33980… XM_011537553.3:c.78+33980G>A	N/A	Intron Variant
PPARGC1B transcript variant X3	XM_011537555.3:c.78+33980… XM_011537555.3:c.78+33980G>A	N/A	Intron Variant
PPARGC1B transcript variant X5	XM_011537557.2:c.78+33980… XM_011537557.2:c.78+33980G>A	N/A	Intron Variant
PPARGC1B transcript variant X4	XM_005268372.4:c.	N/A	Genic Upstream Transcript Variant
PPARGC1B transcript variant X2	XM_011537554.3:c.	N/A	Genic Upstream Transcript Variant

Clinical Significance tab shows a list of clinical significance entries from ClinVar associated with the variation, per allele. Click on the RCV accession (i.e. RCV000001615.2) or Allele ID (i.e. 12274) to access full ClinVar report.

Not Reported in ClinVar

Aliases tab displays HGVS names representing the variant placements and allele changes on genomic, transcript and protein sequences, per allele. HGVS name is an expression for reporting sequence accession and version, sequence type, position, and allele change. The column "Note" can have two values: "diff" means that there is a difference between the reference allele (variation interval) at the placement reported in HGVS name and the reference alleles reported in other HGVS names, and "rev" means that the sequence of this variation interval at the placement reported in HGVS name is in reverse orientation to the sequence(s) of this variation in other HGVS names not labeled as "rev".

Placement	G=	A
GRCh38.p14 chr 5	NC_000005.10:g.149764400=	NC_000005.10:g.149764400G>A
GRCh37.p13 chr 5	NC_000005.9:g.149143963=	NC_000005.9:g.149143963G>A
PPARGC1B RefSeqGene	NG_016747.1:g.39149=	NG_016747.1:g.39149G>A
PPARGC1B transcript variant 2	NM_001172698.1:c.78+33980=	NM_001172698.1:c.78+33980G>A
PPARGC1B transcript variant 2	NM_001172698.2:c.78+33980=	NM_001172698.2:c.78+33980G>A
PPARGC1B transcript variant 1	NM_133263.3:c.78+33980=	NM_133263.3:c.78+33980G>A
PPARGC1B transcript variant 1	NM_133263.4:c.78+33980=	NM_133263.4:c.78+33980G>A
PPARGC1B transcript variant X1	XM_011537553.3:c.78+33980=	XM_011537553.3:c.78+33980G>A
PPARGC1B transcript variant X3	XM_011537555.3:c.78+33980=	XM_011537555.3:c.78+33980G>A
PPARGC1B transcript variant X5	XM_011537557.2:c.78+33980=	XM_011537557.2:c.78+33980G>A

Submissions tab displays variations originally submitted to dbSNP, now supporting this RefSNP cluster (rs). We display Submitter handle, Submission identifier, Date and Build number, when the submission appeared for the first time. Direct submissions to dbSNP have Submission ID in the form of an ss-prefixed number (ss#). Other supporting variations are listed in the table without ss#.

104 SubSNP, 23 Frequency submissions

No	Submitter	Submission ID	Date (Build)
1	CSHL-HAPMAP	ss17081206	Feb 28, 2004 (120)
2	ABI	ss44620571	Mar 14, 2006 (126)
3	ILLUMINA	ss66635989	Nov 29, 2006 (127)
4	ILLUMINA	ss66951878	Nov 29, 2006 (127)
5	ILLUMINA	ss67114749	Nov 29, 2006 (127)
6	ILLUMINA	ss70398842	May 16, 2007 (127)
7	ILLUMINA	ss70540193	May 24, 2008 (130)
8	ILLUMINA	ss71072167	May 16, 2007 (127)
9	ILLUMINA	ss75537271	Dec 07, 2007 (129)
10	AFFY	ss76441159	Dec 07, 2007 (129)
11	KRIBB_YJKIM	ss85133740	Dec 14, 2007 (130)
12	BCMHGSC_JDW	ss93288424	Mar 24, 2008 (129)
13	ILLUMINA	ss121500692	Dec 01, 2009 (131)
14	ENSEMBL	ss143524027	Dec 01, 2009 (131)
15	ILLUMINA	ss153049362	Dec 01, 2009 (131)
16	ILLUMINA	ss159187259	Dec 01, 2009 (131)
17	ILLUMINA	ss160000084	Dec 01, 2009 (131)
18	COMPLETE_GENOMICS	ss162761446	Jul 04, 2010 (132)
19	COMPLETE_GENOMICS	ss167217706	Jul 04, 2010 (132)
20	ILLUMINA	ss169943293	Jul 04, 2010 (132)
21	ILLUMINA	ss171520523	Jul 04, 2010 (132)
22	BUSHMAN	ss201014954	Jul 04, 2010 (132)
23	1000GENOMES	ss222032291	Jul 14, 2010 (132)
24	1000GENOMES	ss233195015	Jul 14, 2010 (132)
25	1000GENOMES	ss240308341	Jul 15, 2010 (132)
26	GMI	ss278527722	May 04, 2012 (137)
27	GMI	ss285281862	Apr 25, 2013 (138)
28	PJP	ss293491690	May 09, 2011 (134)
29	ILLUMINA	ss479582655	May 04, 2012 (137)
30	ILLUMINA	ss479587089	May 04, 2012 (137)
31	ILLUMINA	ss480066133	Sep 08, 2015 (146)
32	ILLUMINA	ss484590087	May 04, 2012 (137)
33	ILLUMINA	ss536719272	Sep 08, 2015 (146)
34	TISHKOFF	ss558789854	Apr 25, 2013 (138)
35	SSMP	ss652693659	Apr 25, 2013 (138)
36	ILLUMINA	ss778764950	Sep 08, 2015 (146)
37	ILLUMINA	ss782741827	Sep 08, 2015 (146)
38	ILLUMINA	ss783708774	Sep 08, 2015 (146)
39	ILLUMINA	ss825368237	Apr 01, 2015 (144)
40	ILLUMINA	ss831993776	Sep 08, 2015 (146)
41	ILLUMINA	ss832699748	Jul 13, 2019 (153)
42	ILLUMINA	ss834224741	Sep 08, 2015 (146)
43	EVA-GONL	ss982251258	Aug 21, 2014 (142)
44	JMKIDD_LAB	ss1073135553	Aug 21, 2014 (142)
45	1000GENOMES	ss1317719479	Aug 21, 2014 (142)
46	EVA_GENOME_DK	ss1581398931	Apr 01, 2015 (144)
47	EVA_DECODE	ss1591783955	Apr 01, 2015 (144)
48	EVA_UK10K_ALSPAC	ss1614282524	Apr 01, 2015 (144)
49	EVA_UK10K_TWINSUK	ss1657276557	Apr 01, 2015 (144)
50	EVA_SVP	ss1712809725	Apr 01, 2015 (144)
51	ILLUMINA	ss1752555703	Sep 08, 2015 (146)
52	HAMMER_LAB	ss1804135106	Sep 08, 2015 (146)
53	WEILL_CORNELL_DGM	ss1925505235	Feb 12, 2016 (147)
54	JJLAB	ss2023360239	Sep 14, 2016 (149)
55	USC_VALOUEV	ss2151518846	Dec 20, 2016 (150)
56	HUMAN_LONGEVITY	ss2279211108	Dec 20, 2016 (150)
57	ILLUMINA	ss2634355609	Nov 08, 2017 (151)
58	GRF	ss2707088503	Nov 08, 2017 (151)
59	GNOMAD	ss2832220893	Nov 08, 2017 (151)
60	SWEGEN	ss2997993073	Nov 08, 2017 (151)
61	ILLUMINA	ss3629369515	Oct 12, 2018 (152)
62	ILLUMINA	ss3632278598	Oct 12, 2018 (152)
63	ILLUMINA	ss3633394059	Oct 12, 2018 (152)
64	ILLUMINA	ss3634115438	Oct 12, 2018 (152)
65	ILLUMINA	ss3635028396	Oct 12, 2018 (152)
66	ILLUMINA	ss3635797081	Oct 12, 2018 (152)
67	ILLUMINA	ss3636741549	Oct 12, 2018 (152)
68	ILLUMINA	ss3637549735	Oct 12, 2018 (152)
69	ILLUMINA	ss3638588097	Oct 12, 2018 (152)
70	ILLUMINA	ss3639296287	Oct 12, 2018 (152)
71	ILLUMINA	ss3639672480	Oct 12, 2018 (152)
72	ILLUMINA	ss3640735690	Oct 12, 2018 (152)
73	ILLUMINA	ss3643531514	Oct 12, 2018 (152)
74	BIOINF_KMB_FNS_UNIBA	ss3645913959	Oct 12, 2018 (152)
75	EGCUT_WGS	ss3665913336	Jul 13, 2019 (153)
76	EVA_DECODE	ss3715943641	Jul 13, 2019 (153)
77	ACPOP	ss3732921937	Jul 13, 2019 (153)
78	ILLUMINA	ss3745328569	Jul 13, 2019 (153)
79	EVA	ss3764215623	Jul 13, 2019 (153)
80	ILLUMINA	ss3772822511	Jul 13, 2019 (153)
81	KHV_HUMAN_GENOMES	ss3807384412	Jul 13, 2019 (153)
82	EVA	ss3829564671	Apr 26, 2020 (154)
83	HGDP	ss3847810989	Apr 26, 2020 (154)
84	SGDP_PRJ	ss3863233664	Apr 26, 2020 (154)
85	KRGDB	ss3909910066	Apr 26, 2020 (154)
86	KOGIC	ss3957884967	Apr 26, 2020 (154)
87	EVA	ss3985177888	Apr 26, 2021 (155)
88	EVA	ss4017237984	Apr 26, 2021 (155)
89	TOPMED	ss4683126662	Apr 26, 2021 (155)
90	TOMMO_GENOMICS	ss5174712558	Apr 26, 2021 (155)
91	1000G_HIGH_COVERAGE	ss5266283203	Oct 13, 2022 (156)
92	EVA	ss5315094864	Oct 13, 2022 (156)
93	EVA	ss5361771660	Oct 13, 2022 (156)
94	HUGCELL_USP	ss5464202817	Oct 13, 2022 (156)
95	EVA	ss5508255408	Oct 13, 2022 (156)
96	1000G_HIGH_COVERAGE	ss5551158543	Oct 13, 2022 (156)
97	SANFORD_IMAGENETICS	ss5639129928	Oct 13, 2022 (156)
98	TOMMO_GENOMICS	ss5711957594	Oct 13, 2022 (156)
99	EVA	ss5799665602	Oct 13, 2022 (156)
100	YY_MCH	ss5806871539	Oct 13, 2022 (156)
101	EVA	ss5835811193	Oct 13, 2022 (156)
102	EVA	ss5855067184	Oct 13, 2022 (156)
103	EVA	ss5896833003	Oct 13, 2022 (156)
104	EVA	ss5967609740	Oct 13, 2022 (156)
105	1000Genomes	NC_000005.9 - 149143963	Oct 12, 2018 (152)
106	1000Genomes_30x	NC_000005.10 - 149764400	Oct 13, 2022 (156)
107	The Avon Longitudinal Study of Parents and Children	NC_000005.9 - 149143963	Oct 12, 2018 (152)
108	Chileans	NC_000005.9 - 149143963	Apr 26, 2020 (154)
109	Genetic variation in the Estonian population	NC_000005.9 - 149143963	Oct 12, 2018 (152)
110	The Danish reference pan genome	NC_000005.9 - 149143963	Apr 26, 2020 (154)
111	gnomAD - Genomes	NC_000005.10 - 149764400	Apr 26, 2021 (155)
112	Genome of the Netherlands Release 5	NC_000005.9 - 149143963	Apr 26, 2020 (154)
113	HGDP-CEPH-db Supplement 1	NC_000005.8 - 149124156	Apr 26, 2020 (154)
114	HapMap	NC_000005.10 - 149764400	Apr 26, 2020 (154)
115	KOREAN population from KRGDB	NC_000005.9 - 149143963	Apr 26, 2020 (154)
116	Korean Genome Project	NC_000005.10 - 149764400	Apr 26, 2020 (154)
117	Northern Sweden	NC_000005.9 - 149143963	Jul 13, 2019 (153)
118	Ancient Sardinia genome-wide 1240k capture data generation and analysis	NC_000005.9 - 149143963	Apr 26, 2021 (155)
119	Qatari	NC_000005.9 - 149143963	Apr 26, 2020 (154)
120	SGDP_PRJ	NC_000005.9 - 149143963	Apr 26, 2020 (154)
121	Siberian	NC_000005.9 - 149143963	Apr 26, 2020 (154)
122	8.3KJPN	NC_000005.9 - 149143963	Apr 26, 2021 (155)
123	14KJPN	NC_000005.10 - 149764400	Oct 13, 2022 (156)
124	TopMed	NC_000005.10 - 149764400	Apr 26, 2021 (155)
125	UK 10K study - Twins	NC_000005.9 - 149143963	Oct 12, 2018 (152)
126	A Vietnamese Genetic Variation Database	NC_000005.9 - 149143963	Jul 13, 2019 (153)
127	ALFA	NC_000005.10 - 149764400	Apr 26, 2021 (155)

History tab displays RefSNPs (Associated ID) from previous builds (Build) that now support the current RefSNP, and the dates, when the history was updated for each Associated ID (History Updated).

Associated ID	History Updated (Build)
rs58139035	May 24, 2008 (130)

Added to this RefSNP Cluster:

Submission IDs	Observation SPDI	Canonical SPDI	Source RSIDs
488881, ss76441159, ss93288424, ss162761446, ss167217706, ss201014954, ss278527722, ss285281862, ss293491690, ss479582655, ss825368237, ss1591783955, ss1712809725, ss3639296287, ss3639672480, ss3643531514, ss3847810989	NC_000005.8:149124155:G:A	NC_000005.10:149764399:G:A	(self)
29415833, 16367462, 361933, 11651584, 7563870, 7266930, 17087460, 6206802, 403815, 7547165, 15250644, 4035200, 32681865, 16367462, 3627511, ss222032291, ss233195015, ss240308341, ss479587089, ss480066133, ss484590087, ss536719272, ss558789854, ss652693659, ss778764950, ss782741827, ss783708774, ss831993776, ss832699748, ss834224741, ss982251258, ss1073135553, ss1317719479, ss1581398931, ss1614282524, ss1657276557, ss1752555703, ss1804135106, ss1925505235, ss2023360239, ss2151518846, ss2634355609, ss2707088503, ss2832220893, ss2997993073, ss3629369515, ss3632278598, ss3633394059, ss3634115438, ss3635028396, ss3635797081, ss3636741549, ss3637549735, ss3638588097, ss3640735690, ss3665913336, ss3732921937, ss3745328569, ss3764215623, ss3772822511, ss3829564671, ss3863233664, ss3909910066, ss3985177888, ss4017237984, ss5174712558, ss5315094864, ss5361771660, ss5508255408, ss5639129928, ss5799665602, ss5835811193, ss5967609740	NC_000005.9:149143962:G:A	NC_000005.10:149764399:G:A	(self)
38684478, 208072699, 2993717, 14262968, 45794698, 520504219, 847253356, ss2279211108, ss3645913959, ss3715943641, ss3807384412, ss3957884967, ss4683126662, ss5266283203, ss5464202817, ss5551158543, ss5711957594, ss5806871539, ss5855067184, ss5896833003	NC_000005.10:149764399:G:A	NC_000005.10:149764399:G:A	(self)
ss17081206	NT_029289.10:10306898:G:A	NC_000005.10:149764399:G:A	(self)
ss44620571, ss66635989, ss66951878, ss67114749, ss70398842, ss70540193, ss71072167, ss75537271, ss85133740, ss121500692, ss143524027, ss153049362, ss159187259, ss160000084, ss169943293, ss171520523	NT_029289.11:10306889:G:A	NC_000005.10:149764399:G:A	(self)

Publications tab displays PubMed articles citing the variation as a listing of PMID, Title, Author, Year, Journal, ordered by Year, descending.

1 citation for rs11746690

PMID	Title	Author	Year	Journal
23409076	Gene set of nuclear-encoded mitochondrial regulators is enriched for common inherited variation in obesity.	Knoll N et al.	2013	PloS one

The Flanks tab provides retrieving flanking sequences of a SNP on all molecules that have placements.

Genome context:

Select flank length:

Genomic regions, transcripts, and products
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NCBI Graphical Sequence Viewer display of the genomic region, transcripts and protein products for the reported RefSNP (rs).
Use the zoom option to view the nucleotides around the RefSNP and find other neighboring RefSNPs.
Visit Sequence Viewer for help with navigating inside the display and modifying the selection of displayed data tracks.

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dbSNP Short Genetic Variations

Welcome to the Reference SNP (rs) Report

Reference SNP (rs) Report

rs11746690