Sharing genomes: an integrated approach to funding, managing and distributing genomic clone resources.

Abstract

National biological resource centres have a vital role in archiving and distributing biological reagents that result from large-scale genome programmes. These reagents are invaluable to the research community as they enable independent validation of results disclosed in peer review and provide tools that facilitate the next steps in discovery science. Here we address the crucial issues of open access, quality of materials, integration with public databases and sustainability of resources.

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Articles referenced by this article (11)

Research materials: share and share alike?
Cyranoski D
Nature, (6916):602-604 2002
MED: 12478260
Cech, T. R. Sharing Publication-Related Data and Materials: Responsibilities of Authorship in the Life Sciences (The National Academies Press, Washington, 2003).
UPSIDE: Uniform principle for sharing integral data and materials expeditiously.
Cozzarelli NR
Proc Natl Acad Sci U S A, (11):3721-3722 2004
MED: 15026576
A vision for the future of genomics research.
Collins FS, Green ED, Guttmacher AE, Guyer MS; US National Human Genome Research Institute
Nature, (6934):835-847 2003
MED: 12695777
A tiling resolution DNA microarray with complete coverage of the human genome.
Ishkanian AS, Malloff CA, Watson SK, DeLeeuw RJ, Chi B, Coe BP, Snijders A, Albertson DG, Pinkel D, Marra MA, Ling V, MacAulay C, Lam WL
Nat Genet, (3):299-303 2004
MED: 14981516
Systematic recovery and analysis of full-ORF human cDNA clones.
Baross A, Butterfield YS, Coughlin SM, Zeng T, Griffith M, Griffith OL, Petrescu AS, Smailus DE, Khattra J, McDonald HL, McKay SJ, Moksa M, Holt RA, Marra MA
Genome Res, (10B):2083-2092 2004
MED: 15489330
The I.M.A.G.E. Consortium: an integrated molecular analysis of genomes and their expression.
Lennon G, Auffray C, Polymeropoulos M, Soares MB
Genomics, (1):151-152 1996
MED: 8617505
Malta provides loophole for breast-cancer screen.
Check E
Nature, (6909):767 2002
MED: 12397316
Wellcome Trust et al. Summary of principles agreed at the first international strategy meeting on human genome sequencing. Human genome project information, [online] < http://www.ornl.gov/sci/techresources/Human_Genome/research/ bermuda.shtml#1 > (Bermuda, 25–28 Feb, 1996).
Food Standards Agency (UK) et al. Joint Code of Practice for Research [online] < http://www.foodstandards.gov.uk/multimedia/pdfs/QACOPRes.PDF > (2004).

Show 1 more reference (10 of 11)

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Addgene provides an open forum for plasmid sharing.
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Models for financial sustainability of biological databases and resources.
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Database (Oxford), 2009:bap017, 23 Oct 2009
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References

Research materials: share and share alike?

Cech, T. R. Sharing Publication-Related Data and Materials: Responsibilities of Authorship in the Life Sciences (The National Academies Press, Washington, 2003).

UPSIDE: Uniform principle for sharing integral data and materials expeditiously.

A vision for the future of genomics research.

A tiling resolution DNA microarray with complete coverage of the human genome.

Systematic recovery and analysis of full-ORF human cDNA clones.

The I.M.A.G.E. Consortium: an integrated molecular analysis of genomes and their expression.

Malta provides loophole for breast-cancer screen.

Wellcome Trust et al. Summary of principles agreed at the first international strategy meeting on human genome sequencing. Human genome project information, [online] < http://www.ornl.gov/sci/techresources/Human_Genome/research/ bermuda.shtml#1 > (Bermuda, 25–28 Feb, 1996).

Food Standards Agency (UK) et al. Joint Code of Practice for Research [online] < http://www.foodstandards.gov.uk/multimedia/pdfs/QACOPRes.PDF > (2004).

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Smart citations by scite.ai
Explore citation contexts and check if this article has been supported or disputed.
https://scite.ai/reports/10.1038/nrg1474

Article citations

Differentially private genome data dissemination through top-down specialization.

Wheat germ systems for cell-free protein expression.

The Standard European Vector Architecture (SEVA): a coherent platform for the analysis and deployment of complex prokaryotic phenotypes.

Addgene provides an open forum for plasmid sharing.

Models for financial sustainability of biological databases and resources.

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Sharing genomes: an integrated approach to funding, managing and distributing genomic clone resources.

Author information

Affiliations

Abstract

Full text links

References

Cech, T. R. Sharing Publication-Related Data and Materials: Responsibilities of Authorship in the Life Sciences (The National Academies Press, Washington, 2003).

Wellcome Trust et al. Summary of principles agreed at the first international strategy meeting on human genome sequencing. Human genome project information, [online] &lt; http://www.ornl.gov/sci/techresources/Human_Genome/research/ bermuda.shtml#1 &gt; (Bermuda, 25–28 Feb, 1996).

Food Standards Agency (UK) et al. Joint Code of Practice for Research [online] &lt; http://www.foodstandards.gov.uk/multimedia/pdfs/QACOPRes.PDF &gt; (2004).

Citations & impact

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Partnerships & funding

Wellcome Trust et al. Summary of principles agreed at the first international strategy meeting on human genome sequencing. Human genome project information, [online] < http://www.ornl.gov/sci/techresources/Human_Genome/research/ bermuda.shtml#1 > (Bermuda, 25–28 Feb, 1996).

Food Standards Agency (UK) et al. Joint Code of Practice for Research [online] < http://www.foodstandards.gov.uk/multimedia/pdfs/QACOPRes.PDF > (2004).