Nothing Special   »   [go: up one dir, main page]

skip to main content
10.5555/244979.245041acmconferencesArticle/Chapter ViewAbstractPublication PagesvisConference Proceedingsconference-collections
Article
Free access

Flexible information visualization of multivariate data from biological sequence similarity searches

Published: 27 October 1996 Publication History
First page of PDF

References

[1]
C. Ahlberg and B. Shneiderman. Visual information seeking: Tight coupling or dynamic query filters with starfield displays. In Proc. ACM CHI '94 Conference, pages 313-317, 1994.
[2]
S. Altschul, W. Gish, W. Miller, E. Myers, and D. Lipman. Basic Local Alignment Search Tool. Journal of Molecular Biology, 215:403--410, 1990.
[3]
D. Asimov. The grand tour: A tool for viewing multidimensional data. SIAM .l. Sci. Statistical Computing, 6(1):128- 143, 1985.
[4]
R. A. Becker, S. G. Eick, and A. R. Wilks. Visualizing network data. IEEE Transaction on Visualization and Computer Graphics, 1 (1): 16-28, 1995.
[5]
D. Benson, M. Boguski, D. Lipman, and J. Ostell. GenBank. Nucleic Acids Research, 22(17):344 I--3A.~A., 1994.
[6]
E. H. Chi, P. Barry, E. Shoop, J. Carlis, E. RetzeI, and J. Riedi. Visualization of biological sequence similarity search results. In IEEE Visualization '95, pages 44-51. IEEE CS Press, 1995.
[7]
S. Crawford and T. Fall. Projection pursuit techniques for visualizing high-dimensional data sets. In IEEE Visualization '90, pages 94-108, 1990.
[8]
M. O. Dayhoff, R. M. Schwartz, and B. C. Orcutt. A model of evolutionary change in proteins. In M. O. Dayhoff, editor, Atlas of Protein Sequence and Structure, VoL 5, Suppl. 3, chapter 22, pages 345-352. National Biomedical Research Foundation, 1978.
[9]
A. W. Donoho, D. L. Donoho, and M. Gask. Macspin: Dynamic graphics on a desktop computer. In W. Cleveland and M. McGill, editors, Dynamic Graphics for Statistics, pages 331-352. Wadsworth and Brooks/Cole, Belmount, Calif., 1988.
[10]
S. Feiner and C. Beshers. Visualizing n-dimensional virtual worlds with n-vision. Computer Graphics, 24(2):37-38, 1990.
[11]
W. Gish and D. States. Identification of protein coding regions by database similarity search. Nature Genetics, 3:266-272, 1993.
[12]
E. Hamori and J. Ruskin. H-curves, a novel method of representation of nucleotide series especially suited for long DNA sequences. Journal of Biological Chemistry, 258(2):1318- 1327, 1983.
[13]
S. Henikoff and J. Henikoff. Performance evaluation of amino acid substitution matrices. Proteins: Structure, Function, and Genetics, 17:49-61, 1993.
[14]
A. Inselberg and B. Dimsdale. Parallel coordinates: A tool for visualizing multi-dimensional geometry. In IEEE Visualization '90, pages 361-378, 1990.
[15]
A. lnselberg and B. Dimsdale. Multi-dimensional lines I and II: Representations and proximity applications. SIAM J. on Appl. Math., 54(2):559-596, 1994.
[16]
H. J. Jeffrey. Chaos game representation of gene structure. Nucleic Acids Research, 18(8):2163-2170, 1990.
[17]
S. Karlin and S. E Altschul. Methods for assessing the statistical significance of molecular sequence features by using general scoring schemes. Proc Natl Acad Sci U S A, 87:2264- 2268, 1990.
[18]
J. W. Tukey, J. H. Friedman, and M. A. Fisherkeller. PRIM- 9, an interactive multidimensional data display and analysis system. In W. Cleveland and M. McGill, editors, Dynamic Graphics for Statistics, pages 91-1 I0. Wadsworth and Brooks/Cole, Belmount, Calif., 1988.
[19]
D. Wu, J. Roberge, D. J. Cork, B. G. Nguyen, and T. Grace. Computer visualization of long genomic sequences. In IEEE Visualization '93, pages 308-315. IEEE CS Press, 1993.

Cited By

View all
  • (2011)MurvisProceedings of the 15th WSEAS international conference on Computers10.5555/2028299.2028348(250-255)Online publication date: 15-Jul-2011
  • (2010)Discovering novelty in gene dataProceedings of the 6th international conference on Advances in visual computing - Volume Part III10.5555/1940092.1940148(534-543)Online publication date: 29-Nov-2010
  • (1998)Comparative Visualization of Protein Structure-Sequence AlignmentsProceedings of the 1998 IEEE Symposium on Information Visualization10.5555/647341.721213Online publication date: 19-Oct-1998
  • Show More Cited By

Recommendations

Comments

Please enable JavaScript to view thecomments powered by Disqus.

Information & Contributors

Information

Published In

cover image ACM Conferences
VIS '96: Proceedings of the 7th conference on Visualization '96
October 1996
516 pages
ISBN:0897918649

Sponsors

Publisher

IEEE Computer Society Press

Washington, DC, United States

Publication History

Published: 27 October 1996

Check for updates

Author Tags

  1. applications of visualization
  2. biomedical visualization
  3. information visualization
  4. multimodal and multidimensional visualization

Qualifiers

  • Article

Conference

VolVis96
Sponsor:
VolVis96: 1996 Symposium on Volume Visualization
October 28 - 29, 1996
California, San Francisco, USA

Contributors

Other Metrics

Bibliometrics & Citations

Bibliometrics

Article Metrics

  • Downloads (Last 12 months)22
  • Downloads (Last 6 weeks)6
Reflects downloads up to 16 Nov 2024

Other Metrics

Citations

Cited By

View all
  • (2011)MurvisProceedings of the 15th WSEAS international conference on Computers10.5555/2028299.2028348(250-255)Online publication date: 15-Jul-2011
  • (2010)Discovering novelty in gene dataProceedings of the 6th international conference on Advances in visual computing - Volume Part III10.5555/1940092.1940148(534-543)Online publication date: 29-Nov-2010
  • (1998)Comparative Visualization of Protein Structure-Sequence AlignmentsProceedings of the 1998 IEEE Symposium on Information Visualization10.5555/647341.721213Online publication date: 19-Oct-1998
  • (1998)An Operator Interaction Framework for Visualization SystemsProceedings of the 1998 IEEE Symposium on Information Visualization10.5555/647341.721078(63-70)Online publication date: 19-Oct-1998
  • (1998)Blurring the distinction between command and data in scientific KDDProceedings of the Fourth International Conference on Knowledge Discovery and Data Mining10.5555/3000292.3000318(154-158)Online publication date: 27-Aug-1998
  • (1998)Principles for Information Visualization SpreadsheetsIEEE Computer Graphics and Applications10.1109/38.68965918:4(30-38)Online publication date: 1-Jul-1998
  • (1997)A spreadsheet approach to information visualizationProceedings of the 1997 IEEE Symposium on Information Visualization (InfoVis '97)10.5555/857188.857626Online publication date: 18-Oct-1997
  • (1997)A spreadsheet approach to information visualizationProceedings of the 10th annual ACM symposium on User interface software and technology10.1145/263407.263513(79-80)Online publication date: 1-Oct-1997

View Options

View options

PDF

View or Download as a PDF file.

PDF

eReader

View online with eReader.

eReader

Login options

Media

Figures

Other

Tables

Share

Share

Share this Publication link

Share on social media